Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_203980.1 Data


Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_116760.1 0 -1.93 -4.95 -12.63 -10.20
Smp_185350.1 0 -1.75 -2.87 -10.48 -10.48
Smp_186130.2 0 -1.40 -3.75 -10.97 -9.77
Smp_201750.1 0 -0.56 -4.79 -7.34 -11.47
Smp_203980.1 0 -0.92 -4.57 -6.89 -8.25
Smp_205870.1 0 -0.54 -2.25 -7.61 -12.32
Smp_206090.1 0 -0.17 -0.84 -12.35 -12.13

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_116760.1 Smp_203980.1 0.93 2.22e-07 1.87e-05
Smp_185350.1 Smp_203980.1 0.97 1.16e-09 5.60e-07
Smp_186130.2 Smp_203980.1 0.95 3.03e-08 4.81e-06
Smp_201750.1 Smp_203980.1 0.96 8.60e-09 2.06e-06
Smp_205870.1 Smp_203980.1 0.95 3.95e-08 5.75e-06
Smp_206090.1 Smp_203980.1 0.95 2.76e-08 4.51e-06