Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_185680.1 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00037-IBu 0 0.38 -1.52 -5.66 -6.88
SmLINC00133-IBu 0 0.41 -1.72 -5.79 -6.76
SmLINC00282-IBu 0 0.07 -1.80 -4.82 -4.14
SmLINC00784-IBu 0 0.40 -3.11 -2.84 -3.25
SmLINC00893-IBu 0 1.08 -1.15 -3.04 -4.37
SmLINC01462-IBu 0 0.69 -0.90 -3.10 -4.62
SmLINC01486-IBu 0 0.59 -1.26 -4.75 -5.22
SmLINC01637-IBu 0 0.25 -0.93 -6.06 -3.40
SmLINC03056-IBu 0 1.41 -1.34 -4.42 -9.40
SmLINC03362-IBu 0 3.01 -2.44 -3.94 -3.85
SmLINC03848-IBu 0 -0.05 -2.68 -3.98 -4.70
SmLINC03930-IBu 0 -0.18 -2.11 -8.92 -4.64
SmLINC04075-IBu 0 0.82 -1.03 -4.58 -4.73
SmLINC04106-IBu 0 1.60 -0.86 -5.26 -10.78
SmLINC04178-IBu 0 2.31 -5.42 -4.19 -7.97
SmLINC04366-IBu 0 0.53 -1.17 -2.70 -4.36
SmLINC04940-IBu 0 3.94 -4.79 -4.79 -4.79
SmLINC05716-IBu 0 0.29 -1.48 -4.28 -5.77
SmLINC05720-IBu 0 0.01 -1.80 -4.98 -8.04
SmLINC05887-IBu 0 1.98 -0.51 -2.69 -3.80
SmLINC05888-IBu 0 4.50 1.82 -0.36 -2.39
SmLINC06210-IBu 0 3.36 -0.61 -1.90 -1.98
SmLINC06669-IBu 0 8.70 4.94 4.70 6.60
Smp_185680.1 0 1.75 -5.39 -10.59 -10.59

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_185680.1 SmLINC00037-IBu 0.89 6.36e-06 1.00e-04
Smp_185680.1 SmLINC00133-IBu 0.91 1.81e-06 7.84e-05
Smp_185680.1 SmLINC00282-IBu 0.87 2.12e-05 4.00e-04
Smp_185680.1 SmLINC00784-IBu 0.89 6.19e-06 1.00e-04
Smp_185680.1 SmLINC00893-IBu 0.85 4.88e-05 8.00e-04
Smp_185680.1 SmLINC01462-IBu 0.86 3.56e-05 6.00e-04
Smp_185680.1 SmLINC01486-IBu 0.92 8.37e-07 4.52e-05
Smp_185680.1 SmLINC01637-IBu 0.84 7.14e-05 1.10e-03
Smp_185680.1 SmLINC03056-IBu 0.93 1.98e-07 1.65e-05
Smp_185680.1 SmLINC03362-IBu 0.97 6.12e-10 3.43e-07
Smp_185680.1 SmLINC03848-IBu 0.89 8.56e-06 2.00e-04
Smp_185680.1 SmLINC03930-IBu 0.86 3.11e-05 6.00e-04
Smp_185680.1 SmLINC04075-IBu 0.88 1.01e-05 2.00e-04
Smp_185680.1 SmLINC04106-IBu 0.87 1.65e-05 3.00e-04
Smp_185680.1 SmLINC04178-IBu 0.89 7.39e-06 2.00e-04
Smp_185680.1 SmLINC04366-IBu 0.92 9.41e-07 4.91e-05
Smp_185680.1 SmLINC04940-IBu 0.91 1.78e-06 7.74e-05
Smp_185680.1 SmLINC05716-IBu 0.88 1.48e-05 3.00e-04
Smp_185680.1 SmLINC05720-IBu 0.80 2.00e-04 2.90e-03
Smp_185680.1 SmLINC05887-IBu 0.84 6.46e-05 1.00e-03
Smp_185680.1 SmLINC05888-IBu 0.88 1.12e-05 2.00e-04
Smp_185680.1 SmLINC06210-IBu 0.97 6.12e-10 3.43e-07
Smp_185680.1 SmLINC06669-IBu 0.81 2.00e-04 2.60e-03
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00050-IBu 0 0.53 -1.98 -4.97 -3.48
SmLINC00133-IBu 0 0.41 -1.72 -5.79 -6.76
SmLINC00514-IBu 0 0.52 -8.42 -4.05 -6.11
SmLINC00763-IBu 0 0.29 -12.05 -6.81 -12.05
SmLINC00917-IBu 0 0.87 -0.94 -4.33 -5.42
SmLINC01088-IBu 0 0.12 -2.15 -3.73 -3.81
SmLINC01459-IBu 0 0.54 -1.00 -3.24 -4.18
SmLINC01486-IBu 0 0.59 -1.26 -4.75 -5.22
SmLINC01687-IBu 0 0.90 -0.63 -2.98 -3.68
SmLINC01703-IBu 0 0.45 -1.31 -4.28 -4.91
SmLINC01705-IBu 0 0.21 -2.02 -4.88 -6.15
SmLINC01706-IBu 0 1.10 -1.07 -2.54 -3.71
SmLINC01725-IBu 0 1.14 -1.23 -3.05 -5.30
SmLINC02220-IBu 0 1.37 -1.17 -3.21 -3.83
SmLINC02609-IBu 0 0.63 -2.31 -10.45 -10.45
SmLINC02671-IBu 0 1.35 -1.05 -3.69 -6.04
SmLINC02707-IBu 0 0.87 -1.10 -3.69 -4.98
SmLINC03056-IBu 0 1.41 -1.34 -4.42 -9.40
SmLINC03129-IBu 0 0.38 -1.94 -3.38 -3.83
SmLINC03362-IBu 0 3.01 -2.44 -3.94 -3.85
SmLINC03363-IBu 0 3.48 -0.10 -1.02 0.92
SmLINC03450-IBu 0 0.92 -1.05 -3.79 -3.79
SmLINC03565-IBu 0 0.98 -1.34 -4.00 -5.34
SmLINC03663-IBu 0 0.69 -1.37 -3.57 -4.79
SmLINC03716-IBu 0 0.96 -1.59 -3.29 -5.50
SmLINC03897-IBu 0 0.23 -1.59 -3.45 -4.44
SmLINC03980-IBu 0 0.74 -9.43 -9.40 -9.93
SmLINC04148-IBu 0 1.30 -1.14 -2.68 -3.46
SmLINC04170-IBu 0 0.99 -1.39 -7.39 -3.61
SmLINC04303-IBu 0 1.06 -1.38 -3.42 -4.74
SmLINC04366-IBu 0 0.53 -1.17 -2.70 -4.36
SmLINC04940-IBu 0 3.94 -4.79 -4.79 -4.79
SmLINC05523-IBu 0 1.09 -1.05 -3.75 -5.46
SmLINC05583-IBu 0 1.72 -1.06 -2.74 -3.52
SmLINC05845-IBu 0 1.91 -2.79 -8.03 -8.03
SmLINC05875-IBu 0 0.96 -1.21 -3.14 -4.44
SmLINC05880-IBu 0 6.03 2.62 1.21 1.44
SmLINC05908-IBu 0 4.74 -1.08 -2.12 -1.94
SmLINC06087-IBu 0 0.85 -2.76 -2.63 -5.11
SmLINC06110-IBu 0 0.74 -1.72 -4.26 -4.50
SmLINC06210-IBu 0 3.36 -0.61 -1.90 -1.98
SmLINC06424-IBu 0 0.67 -0.98 -3.65 -4.75
SmLINC06551-IBu 0 0.64 -1.60 -2.60 -6.93
SmLINC06741-IBu 0 1.43 -0.37 -4.92 -4.79
SmLINC06771-IBu 0 1.01 -0.88 -11.54 -11.54
SmLINC06888-IBu 0 1.74 -1.97 -6.03 -4.97
Smp_000250.1 0 2.54 -1.10 -4.67 -4.67
Smp_017080.3 0 1.61 -1.79 -3.44 -4.38
Smp_019000.1 0 2.12 -4.51 -7.54 -7.54
Smp_020840.1 0 0.75 -4.50 -3.36 -3.70
Smp_030010.1 0 0.62 -6.53 -3.86 -5.21
Smp_032320.1 0 1.14 -10.97 -10.97 -10.97
Smp_038560.1 0 0.43 -3.62 -2.65 -4.65
Smp_049250.1 0 1.49 -2.10 -4.41 -4.17
Smp_049300.3 0 1.86 -0.79 -4.47 -2.75
Smp_049300.4 0 1.54 -4.40 -4.53 -7.24
Smp_061590.2 0 0.20 -1.67 -5.35 -5.03
Smp_072320.1 0 3.42 -1.99 -6.26 -3.11
Smp_080920.1 0 1.28 -1.93 -2.08 -3.64
Smp_080920.2 0 2.36 -1.44 -1.25 -3.25
Smp_089860.1 0 4.05 -0.23 -9.08 -5.43
Smp_094680.1 0 1.98 -4.03 -4.17 -3.96
Smp_097020.1 0 2.16 -2.18 -9.25 -3.98
Smp_106930.1 0 3.72 0.12 -3.92 -3.35
Smp_111340.6 0 0.97 -0.72 -7.78 -9.70
Smp_111340.9 0 1.30 0.22 -5.61 -6.61
Smp_111640.1 0 0.66 -0.66 -11.28 -11.28
Smp_113310.1 0 1.47 -2.62 -5.78 -7.51
Smp_123100.1 0 1.03 -1.57 -3.15 -3.94
Smp_124140.1 0 2.40 0.33 -1.66 -2.77
Smp_131830.1 0 1.24 0.03 -5.02 -4.76
Smp_136240.5 0 8.50 0.00 0.00 0.00
Smp_147530.1 0 2.28 -0.50 -3.10 -5.24
Smp_149750.1 0 1.75 -0.10 -5.34 -5.55
Smp_159610.1 0 2.56 -4.50 -4.50 -6.59
Smp_163710.1 0 0.07 -4.89 -1.71 -2.93
Smp_165050.1 0 0.40 -6.48 -1.35 -2.34
Smp_165510.1 0 0.09 -3.88 -8.04 -8.63
Smp_171360.1 0 3.13 -2.66 -4.89 -4.89
Smp_171700.1 0 2.41 -0.03 -2.60 -6.02
Smp_177380.1 0 7.51 1.65 4.19 0.67
Smp_178170.1 0 1.66 -1.97 -7.62 -7.62
Smp_182090.1 0 0.34 -10.52 -4.07 -5.68
Smp_182940.1 0 4.10 -0.33 -4.76 -4.76
Smp_184710.1 0 0.54 -2.76 -11.35 -9.04
Smp_184860.1 0 2.74 -0.82 -5.81 -5.81
Smp_185560.1 0 0.07 -2.33 -8.32 -8.32
Smp_185680.1 0 1.75 -5.39 -10.59 -10.59
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_186020.1 0 0.85 -2.69 -7.72 -7.80
Smp_189120.1 0 3.83 -0.95 -5.44 -3.13
Smp_200010.1 0 6.19 -0.25 -7.50 -5.12
Smp_200160.1 0 0.65 -1.01 -6.08 -6.08
Smp_200470.1 0 1.40 -2.54 -7.67 -7.67
Smp_200770.1 0 1.89 0.38 -8.15 -8.15
Smp_200900.1 0 1.23 -4.76 -2.64 -1.93
Smp_201000.1 0 6.84 0.00 2.13 2.38
Smp_201420.1 0 2.63 1.48 -3.49 -3.49
Smp_201790.1 0 4.46 -3.38 -3.38 -3.38
Smp_201930.1 0 1.32 -0.08 -4.89 -5.07
Smp_201940.1 0 1.70 -2.07 -7.99 -7.99
Smp_202160.1 0 2.79 -1.17 -2.66 -1.06
Smp_202490.1 0 0.07 -2.34 -9.58 -9.58
Smp_202670.1 0 2.19 -3.90 -5.33 -5.33
Smp_203920.1 0 0.58 -2.39 -6.11 -7.08
Smp_204190.1 0 3.21 -3.16 -0.75 1.19
Smp_204360.1 0 0.81 -0.39 -6.29 -10.08
Smp_204460.1 0 1.62 -2.55 -6.93 -6.93
Smp_204650.1 0 7.45 2.61 0.00 2.29
Smp_204660.1 0 1.01 -4.53 -7.96 -8.16
Smp_205120.1 0 2.69 -1.75 -5.80 -7.84
Smp_205280.1 0 0.75 0.23 -4.69 -4.81
Smp_205460.1 0 0.98 -3.11 -8.72 -8.72
Smp_205930.1 0 0.31 -2.62 -7.34 -9.86

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_185680.1 SmLINC00050-IBu 0.90 3.24e-06 1.00e-04
Smp_185680.1 SmLINC00133-IBu 0.91 1.81e-06 8.13e-05
Smp_185680.1 SmLINC00514-IBu 0.97 2.67e-10 2.18e-07
Smp_185680.1 SmLINC00763-IBu 0.90 3.63e-06 1.00e-04
Smp_185680.1 SmLINC00917-IBu 0.90 3.03e-06 1.00e-04
Smp_185680.1 SmLINC01088-IBu 0.90 3.49e-06 1.00e-04
Smp_185680.1 SmLINC01459-IBu 0.90 2.56e-06 1.00e-04
Smp_185680.1 SmLINC01486-IBu 0.92 8.37e-07 4.70e-05
Smp_185680.1 SmLINC01687-IBu 0.92 5.54e-07 3.53e-05
Smp_185680.1 SmLINC01703-IBu 0.90 3.48e-06 1.00e-04
Smp_185680.1 SmLINC01705-IBu 0.91 1.49e-06 7.07e-05
Smp_185680.1 SmLINC01706-IBu 0.95 3.18e-08 4.97e-06
Smp_185680.1 SmLINC01725-IBu 0.96 2.89e-09 1.01e-06
Smp_185680.1 SmLINC02220-IBu 0.97 1.53e-09 6.70e-07
Smp_185680.1 SmLINC02609-IBu 0.92 6.83e-07 4.08e-05
Smp_185680.1 SmLINC02671-IBu 0.94 1.74e-07 1.58e-05
Smp_185680.1 SmLINC02707-IBu 0.90 4.38e-06 1.00e-04
Smp_185680.1 SmLINC03056-IBu 0.93 1.98e-07 1.73e-05
Smp_185680.1 SmLINC03129-IBu 0.93 3.71e-07 2.67e-05
Smp_185680.1 SmLINC03362-IBu 0.97 6.12e-10 3.72e-07
Smp_185680.1 SmLINC03363-IBu 0.96 1.09e-08 2.42e-06
Smp_185680.1 SmLINC03450-IBu 0.91 1.72e-06 7.82e-05
Smp_185680.1 SmLINC03565-IBu 0.95 2.76e-08 4.51e-06
Smp_185680.1 SmLINC03663-IBu 0.93 2.56e-07 2.06e-05
Smp_185680.1 SmLINC03716-IBu 0.92 5.68e-07 3.59e-05
Smp_185680.1 SmLINC03897-IBu 0.92 5.36e-07 3.45e-05
Smp_185680.1 SmLINC03980-IBu 0.92 8.09e-07 4.60e-05
Smp_185680.1 SmLINC04148-IBu 0.93 4.39e-07 3.00e-05
Smp_185680.1 SmLINC04170-IBu 0.94 1.33e-07 1.31e-05
Smp_185680.1 SmLINC04303-IBu 0.96 6.83e-09 1.77e-06
Smp_185680.1 SmLINC04366-IBu 0.92 9.41e-07 5.11e-05
Smp_185680.1 SmLINC04940-IBu 0.91 1.78e-06 8.02e-05
Smp_185680.1 SmLINC05523-IBu 0.90 2.99e-06 1.00e-04
Smp_185680.1 SmLINC05583-IBu 0.94 7.58e-08 8.96e-06
Smp_185680.1 SmLINC05845-IBu 0.96 1.42e-08 2.89e-06
Smp_185680.1 SmLINC05875-IBu 0.91 1.37e-06 6.66e-05
Smp_185680.1 SmLINC05880-IBu 0.91 2.16e-06 9.19e-05
Smp_185680.1 SmLINC05908-IBu 0.95 5.57e-08 7.27e-06
Smp_185680.1 SmLINC06087-IBu 0.92 7.45e-07 4.34e-05
Smp_185680.1 SmLINC06110-IBu 0.91 1.96e-06 8.58e-05
Smp_185680.1 SmLINC06210-IBu 0.97 6.12e-10 3.72e-07
Smp_185680.1 SmLINC06424-IBu 0.92 7.24e-07 4.25e-05
Smp_185680.1 SmLINC06551-IBu 0.92 1.02e-06 5.44e-05
Smp_185680.1 SmLINC06741-IBu 0.90 2.76e-06 1.00e-04
Smp_185680.1 SmLINC06771-IBu 0.94 7.57e-08 8.94e-06
Smp_185680.1 SmLINC06888-IBu 0.94 1.10e-07 1.15e-05
Smp_185680.1 Smp_000250.1 0.94 1.24e-07 1.25e-05
Smp_017080.3 Smp_185680.1 0.93 3.23e-07 2.43e-05
Smp_185680.1 Smp_019000.1 0.97 2.64e-10 2.17e-07
Smp_185680.1 Smp_020840.1 0.97 1.77e-09 7.34e-07
Smp_185680.1 Smp_030010.1 0.92 6.87e-07 4.10e-05
Smp_185680.1 Smp_032320.1 0.91 2.02e-06 8.77e-05
Smp_185680.1 Smp_038560.1 0.91 1.38e-06 6.71e-05
Smp_049250.1 Smp_185680.1 0.94 1.36e-07 1.33e-05
Smp_185680.1 Smp_049300.3 0.91 2.14e-06 9.13e-05
Smp_185680.1 Smp_049300.4 0.91 1.36e-06 6.65e-05
Smp_061590.2 Smp_185680.1 0.90 3.17e-06 1.00e-04
Smp_185680.1 Smp_072320.1 0.95 3.07e-08 4.86e-06
Smp_185680.1 Smp_080920.1 0.96 1.03e-08 2.33e-06
Smp_185680.1 Smp_080920.2 0.96 3.02e-09 1.04e-06
Smp_185680.1 Smp_089860.1 0.96 1.00e-08 2.29e-06
Smp_185680.1 Smp_094680.1 0.98 4.76e-11 7.29e-08
Smp_185680.1 Smp_097020.1 0.93 2.02e-07 1.75e-05
Smp_185680.1 Smp_106930.1 0.90 2.93e-06 1.00e-04
Smp_111340.6 Smp_185680.1 0.92 6.24e-07 3.83e-05
Smp_185680.1 Smp_111340.9 0.97 4.47e-10 3.04e-07
Smp_185680.1 Smp_111640.1 0.92 8.05e-07 4.58e-05
Smp_185680.1 Smp_113310.1 0.92 6.14e-07 3.79e-05
Smp_185680.1 Smp_123100.1 0.98 1.33e-11 3.28e-08
Smp_185680.1 Smp_124140.1 0.97 7.85e-10 4.36e-07
Smp_131830.1 Smp_185680.1 0.92 6.30e-07 3.86e-05
Smp_185680.1 Smp_136240.5 0.90 4.08e-06 1.00e-04
Smp_185680.1 Smp_147530.1 0.97 1.16e-09 5.62e-07
Smp_185680.1 Smp_149750.1 0.90 4.09e-06 1.00e-04
Smp_185680.1 Smp_159610.1 0.97 6.22e-10 3.76e-07
Smp_185680.1 Smp_163710.1 0.94 1.37e-07 1.34e-05
Smp_185680.1 Smp_165050.1 0.94 1.38e-07 1.35e-05
Smp_185680.1 Smp_165510.1 0.90 2.62e-06 1.00e-04
Smp_185680.1 Smp_171360.1 0.98 1.03e-10 1.19e-07
Smp_185680.1 Smp_171700.1 0.99 1.43e-12 8.28e-09
Smp_185680.1 Smp_177380.1 0.95 3.94e-08 5.75e-06
Smp_185680.1 Smp_178170.1 0.98 2.78e-11 5.22e-08
Smp_185680.1 Smp_182090.1 0.95 4.48e-08 6.27e-06
Smp_185680.1 Smp_182940.1 0.97 1.83e-10 1.72e-07
Smp_185680.1 Smp_184710.1 0.91 2.15e-06 9.15e-05
Smp_185680.1 Smp_184860.1 0.95 2.61e-08 4.35e-06
Smp_185680.1 Smp_185560.1 0.90 2.92e-06 1.00e-04
Smp_185830.1 Smp_185680.1 0.93 4.12e-07 2.87e-05
Smp_185680.1 Smp_186020.1 0.93 2.09e-07 1.79e-05
Smp_189120.1 Smp_185680.1 0.96 1.01e-08 2.30e-06
Smp_185680.1 Smp_200010.1 0.98 1.37e-10 1.42e-07
Smp_185680.1 Smp_200160.1 0.93 2.79e-07 2.19e-05
Smp_185680.1 Smp_200470.1 0.97 1.23e-09 5.82e-07
Smp_200770.1 Smp_185680.1 0.92 5.42e-07 3.47e-05
Smp_185680.1 Smp_200900.1 0.94 1.52e-07 1.44e-05
Smp_185680.1 Smp_201000.1 0.91 2.05e-06 8.87e-05
Smp_185680.1 Smp_201420.1 0.93 1.99e-07 1.74e-05
Smp_185680.1 Smp_201790.1 0.98 8.79e-11 1.07e-07
Smp_185680.1 Smp_201930.1 0.96 6.34e-09 1.69e-06
Smp_185680.1 Smp_201940.1 0.97 6.54e-10 3.88e-07
Smp_185680.1 Smp_202160.1 0.91 1.20e-06 6.07e-05
Smp_185680.1 Smp_202490.1 0.92 8.82e-07 4.88e-05
Smp_185680.1 Smp_202670.1 0.98 7.57e-12 2.32e-08
Smp_203920.1 Smp_185680.1 0.90 2.73e-06 1.00e-04
Smp_204190.1 Smp_185680.1 0.91 2.47e-06 1.00e-04
Smp_185680.1 Smp_204360.1 0.93 5.05e-07 3.31e-05
Smp_185680.1 Smp_204460.1 0.96 3.16e-09 1.07e-06
Smp_185680.1 Smp_204650.1 0.94 1.92e-07 1.69e-05
Smp_185680.1 Smp_204660.1 0.95 2.02e-08 3.66e-06
Smp_185680.1 Smp_205120.1 0.97 2.00e-10 1.81e-07
Smp_205280.1 Smp_185680.1 0.92 9.92e-07 5.30e-05
Smp_185680.1 Smp_205460.1 0.97 2.61e-10 2.15e-07
Smp_185680.1 Smp_205930.1 0.92 6.30e-07 3.86e-05