Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_185170.1 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00026-IBu 0 1.41 -0.25 -3.45 -4.99
SmLINC00037-IBu 0 0.38 -1.52 -5.66 -6.88
SmLINC00133-IBu 0 0.41 -1.72 -5.79 -6.76
SmLINC00282-IBu 0 0.07 -1.80 -4.82 -4.14
SmLINC00294-IBu 0 0.33 -0.47 -2.74 -4.74
SmLINC00784-IBu 0 0.40 -3.11 -2.84 -3.25
SmLINC00893-IBu 0 1.08 -1.15 -3.04 -4.37
SmLINC01462-IBu 0 0.69 -0.90 -3.10 -4.62
SmLINC01486-IBu 0 0.59 -1.26 -4.75 -5.22
SmLINC01637-IBu 0 0.25 -0.93 -6.06 -3.40
SmLINC03056-IBu 0 1.41 -1.34 -4.42 -9.40
SmLINC03362-IBu 0 3.01 -2.44 -3.94 -3.85
SmLINC03848-IBu 0 -0.05 -2.68 -3.98 -4.70
SmLINC03930-IBu 0 -0.18 -2.11 -8.92 -4.64
SmLINC04075-IBu 0 0.82 -1.03 -4.58 -4.73
SmLINC04106-IBu 0 1.60 -0.86 -5.26 -10.78
SmLINC04271-IBu 0 0.79 -0.67 -2.59 -4.22
SmLINC04366-IBu 0 0.53 -1.17 -2.70 -4.36
SmLINC04940-IBu 0 3.94 -4.79 -4.79 -4.79
SmLINC05284-IBu 0 -0.31 -1.54 -3.79 -5.97
SmLINC05716-IBu 0 0.29 -1.48 -4.28 -5.77
SmLINC05720-IBu 0 0.01 -1.80 -4.98 -8.04
SmLINC05887-IBu 0 1.98 -0.51 -2.69 -3.80
SmLINC06210-IBu 0 3.36 -0.61 -1.90 -1.98
SmLINC06535-IBu 0 -0.47 -1.74 -4.21 -5.43
Smp_185170.1 0 0.77 -2.29 -11.66 -11.66

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_185170.1 SmLINC00026-IBu 0.85 4.55e-05 7.00e-04
Smp_185170.1 SmLINC00037-IBu 0.91 1.49e-06 6.82e-05
Smp_185170.1 SmLINC00133-IBu 0.91 1.29e-06 6.17e-05
Smp_185170.1 SmLINC00282-IBu 0.90 3.09e-06 1.00e-04
Smp_185170.1 SmLINC00294-IBu 0.88 1.43e-05 3.00e-04
Smp_185170.1 SmLINC00784-IBu 0.83 9.73e-05 1.30e-03
Smp_185170.1 SmLINC00893-IBu 0.82 1.00e-04 1.90e-03
Smp_185170.1 SmLINC01462-IBu 0.92 6.46e-07 3.77e-05
Smp_185170.1 SmLINC01486-IBu 0.92 1.00e-06 5.15e-05
Smp_185170.1 SmLINC01637-IBu 0.90 4.75e-06 1.00e-04
Smp_185170.1 SmLINC03056-IBu 0.86 2.79e-05 5.00e-04
Smp_185170.1 SmLINC03362-IBu 0.86 3.10e-05 6.00e-04
Smp_185170.1 SmLINC03848-IBu 0.85 5.33e-05 8.00e-04
Smp_185170.1 SmLINC03930-IBu 0.84 8.84e-05 1.20e-03
Smp_185170.1 SmLINC04075-IBu 0.88 1.00e-05 2.00e-04
Smp_185170.1 SmLINC04106-IBu 0.85 5.96e-05 9.00e-04
Smp_185170.1 SmLINC04271-IBu 0.85 4.40e-05 7.00e-04
Smp_185170.1 SmLINC04366-IBu 0.95 5.11e-08 6.47e-06
Smp_185170.1 SmLINC04940-IBu 0.80 2.00e-04 3.00e-03
Smp_185170.1 SmLINC05284-IBu 0.81 1.00e-04 2.30e-03
Smp_185170.1 SmLINC05716-IBu 0.95 3.68e-08 5.18e-06
Smp_185170.1 SmLINC05720-IBu 0.83 8.93e-05 1.30e-03
Smp_185170.1 SmLINC05887-IBu 0.81 2.00e-04 2.50e-03
Smp_185170.1 SmLINC06210-IBu 0.87 2.05e-05 4.00e-04
Smp_185170.1 SmLINC06535-IBu 0.82 1.00e-04 2.00e-03
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00037-IBu 0 0.38 -1.52 -5.66 -6.88
SmLINC00133-IBu 0 0.41 -1.72 -5.79 -6.76
SmLINC00154-IBu 0 1.01 -1.28 -8.39 -8.39
SmLINC00282-IBu 0 0.07 -1.80 -4.82 -4.14
SmLINC00917-IBu 0 0.87 -0.94 -4.33 -5.42
SmLINC01041-IBu 0 0.82 -1.56 -5.60 -4.73
SmLINC01268-IBu 0 1.32 -0.16 -3.78 -3.88
SmLINC01362-IBu 0 0.33 -1.08 -3.83 -4.89
SmLINC01459-IBu 0 0.54 -1.00 -3.24 -4.18
SmLINC01462-IBu 0 0.69 -0.90 -3.10 -4.62
SmLINC01486-IBu 0 0.59 -1.26 -4.75 -5.22
SmLINC01637-IBu 0 0.25 -0.93 -6.06 -3.40
SmLINC01687-IBu 0 0.90 -0.63 -2.98 -3.68
SmLINC01703-IBu 0 0.45 -1.31 -4.28 -4.91
SmLINC01706-IBu 0 1.10 -1.07 -2.54 -3.71
SmLINC01725-IBu 0 1.14 -1.23 -3.05 -5.30
SmLINC01888-IBu 0 0.19 -1.52 -3.63 -4.69
SmLINC02195-IBu 0 0.99 -1.15 -6.76 -6.76
SmLINC02198-IBu 0 0.33 -0.29 -6.35 -11.80
SmLINC02220-IBu 0 1.37 -1.17 -3.21 -3.83
SmLINC02334-IBu 0 0.29 -1.21 -3.45 -5.81
SmLINC02671-IBu 0 1.35 -1.05 -3.69 -6.04
SmLINC02729-IBu 0 1.60 -0.39 -6.30 -6.30
SmLINC02909-IBu 0 0.52 -0.92 -5.59 -5.77
SmLINC02992-IBu 0 0.99 -0.36 -7.90 -7.96
SmLINC03062-IBu 0 0.13 -1.25 -3.97 -4.62
SmLINC03063-IBu 0 0.35 -1.04 -3.81 -4.86
SmLINC03450-IBu 0 0.92 -1.05 -3.79 -3.79
SmLINC03565-IBu 0 0.98 -1.34 -4.00 -5.34
SmLINC03663-IBu 0 0.69 -1.37 -3.57 -4.79
SmLINC03716-IBu 0 0.96 -1.59 -3.29 -5.50
SmLINC03897-IBu 0 0.23 -1.59 -3.45 -4.44
SmLINC04027-IBu 0 0.36 -1.40 -3.47 -5.23
SmLINC04094-IBu 0 0.08 -1.37 -3.97 -4.39
SmLINC04147-IBu 0 0.60 -1.27 -3.78 -3.31
SmLINC04150-IBu 0 0.78 -1.10 -6.88 -6.03
SmLINC04170-IBu 0 0.99 -1.39 -7.39 -3.61
SmLINC04294-IBu 0 0.39 -1.15 -3.49 -5.00
SmLINC04303-IBu 0 1.06 -1.38 -3.42 -4.74
SmLINC04318-IBu 0 1.04 -0.62 -4.14 -5.21
SmLINC04366-IBu 0 0.53 -1.17 -2.70 -4.36
SmLINC04395-IBu 0 0.52 -0.35 -3.28 -4.47
SmLINC04443-IBu 0 0.55 -0.36 -3.67 -9.70
SmLINC05023-IBu 0 0.43 -1.01 -4.23 -4.93
SmLINC05497-IBu 0 1.15 -0.56 -3.36 -4.36
SmLINC05572-IBu 0 0.06 -1.32 -4.02 -9.37
SmLINC05583-IBu 0 1.72 -1.06 -2.74 -3.52
SmLINC05586-IBu 0 0.17 -1.90 -6.28 -7.97
SmLINC05617-IBu 0 0.17 -1.19 -2.37 -8.18
SmLINC05716-IBu 0 0.29 -1.48 -4.28 -5.77
SmLINC05845-IBu 0 1.91 -2.79 -8.03 -8.03
SmLINC05875-IBu 0 0.96 -1.21 -3.14 -4.44
SmLINC05903-IBu 0 1.38 -0.00 -2.02 -6.35
SmLINC05925-IBu 0 0.44 -1.21 -1.73 -5.30
SmLINC05956-IBu 0 0.14 -1.45 -3.73 -4.48
SmLINC06336-IBu 0 0.18 -1.19 -3.28 -4.48
SmLINC06383-IBu 0 0.40 -1.51 -4.06 -6.48
SmLINC06424-IBu 0 0.67 -0.98 -3.65 -4.75
SmLINC06551-IBu 0 0.64 -1.60 -2.60 -6.93
SmLINC06561-IBu 0 0.50 -0.92 -3.69 -3.97
SmLINC06610-IBu 0 -0.00 -1.33 -3.85 -4.79
SmLINC06741-IBu 0 1.43 -0.37 -4.92 -4.79
SmLINC06771-IBu 0 1.01 -0.88 -11.54 -11.54
Smp_107590.1 0 4.34 2.46 -4.22 -4.22
Smp_110400.1 0 0.09 -0.79 -8.02 -8.98
Smp_111340.6 0 0.97 -0.72 -7.78 -9.70
Smp_111340.9 0 1.30 0.22 -5.61 -6.61
Smp_111640.1 0 0.66 -0.66 -11.28 -11.28
Smp_131830.1 0 1.24 0.03 -5.02 -4.76
Smp_149750.1 0 1.75 -0.10 -5.34 -5.55
Smp_184710.1 0 0.54 -2.76 -11.35 -9.04
Smp_185170.1 0 0.77 -2.29 -11.66 -11.66
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_201390.1 0 0.48 -0.11 -6.75 -6.75
Smp_203790.1 0 1.11 -0.83 -4.01 -6.96
Smp_203920.1 0 0.58 -2.39 -6.11 -7.08
Smp_204360.1 0 0.81 -0.39 -6.29 -10.08
Smp_205450.1 0 0.54 -1.87 -11.14 -11.14
Smp_205460.1 0 0.98 -3.11 -8.72 -8.72
Smp_205480.1 0 0.40 -2.39 -9.52 -9.52
Smp_205950.1 0 0.03 -0.56 -9.25 -9.25

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_185170.1 SmLINC00037-IBu 0.91 1.49e-06 7.08e-05
Smp_185170.1 SmLINC00133-IBu 0.91 1.29e-06 6.41e-05
Smp_185170.1 SmLINC00154-IBu 0.92 8.26e-07 4.66e-05
Smp_185170.1 SmLINC00282-IBu 0.90 3.09e-06 1.00e-04
Smp_185170.1 SmLINC00917-IBu 0.94 1.04e-07 1.11e-05
Smp_185170.1 SmLINC01041-IBu 0.93 2.60e-07 2.08e-05
Smp_185170.1 SmLINC01268-IBu 0.94 7.67e-08 9.03e-06
Smp_185170.1 SmLINC01362-IBu 0.93 3.31e-07 2.46e-05
Smp_185170.1 SmLINC01459-IBu 0.90 3.89e-06 1.00e-04
Smp_185170.1 SmLINC01462-IBu 0.92 6.46e-07 3.93e-05
Smp_185170.1 SmLINC01486-IBu 0.92 1.00e-06 5.35e-05
Smp_185170.1 SmLINC01637-IBu 0.90 4.75e-06 1.00e-04
Smp_185170.1 SmLINC01687-IBu 0.95 5.18e-08 6.92e-06
Smp_185170.1 SmLINC01703-IBu 0.93 2.20e-07 1.86e-05
Smp_185170.1 SmLINC01706-IBu 0.92 8.06e-07 4.58e-05
Smp_185170.1 SmLINC01725-IBu 0.92 1.04e-06 5.49e-05
Smp_185170.1 SmLINC01888-IBu 0.90 3.02e-06 1.00e-04
Smp_185170.1 SmLINC02195-IBu 0.90 4.56e-06 1.00e-04
Smp_185170.1 SmLINC02198-IBu 0.93 3.59e-07 2.61e-05
Smp_185170.1 SmLINC02220-IBu 0.91 1.55e-06 7.28e-05
Smp_185170.1 SmLINC02334-IBu 0.93 4.03e-07 2.83e-05
Smp_185170.1 SmLINC02671-IBu 0.91 2.21e-06 9.35e-05
Smp_185170.1 SmLINC02729-IBu 0.90 2.60e-06 1.00e-04
Smp_185170.1 SmLINC02909-IBu 0.93 2.86e-07 2.23e-05
Smp_185170.1 SmLINC02992-IBu 0.91 1.50e-06 7.12e-05
Smp_185170.1 SmLINC03062-IBu 0.91 1.82e-06 8.14e-05
Smp_185170.1 SmLINC03063-IBu 0.91 1.80e-06 8.08e-05
Smp_185170.1 SmLINC03450-IBu 0.92 1.06e-06 5.56e-05
Smp_185170.1 SmLINC03565-IBu 0.90 3.68e-06 1.00e-04
Smp_185170.1 SmLINC03663-IBu 0.93 3.40e-07 2.51e-05
Smp_185170.1 SmLINC03716-IBu 0.90 3.78e-06 1.00e-04
Smp_185170.1 SmLINC03897-IBu 0.91 1.29e-06 6.40e-05
Smp_185170.1 SmLINC04027-IBu 0.90 4.17e-06 1.00e-04
Smp_185170.1 SmLINC04094-IBu 0.90 2.98e-06 1.00e-04
Smp_185170.1 SmLINC04147-IBu 0.90 4.36e-06 1.00e-04
Smp_185170.1 SmLINC04150-IBu 0.93 3.35e-07 2.49e-05
Smp_185170.1 SmLINC04170-IBu 0.91 1.73e-06 7.87e-05
Smp_185170.1 SmLINC04294-IBu 0.91 2.07e-06 8.93e-05
Smp_185170.1 SmLINC04303-IBu 0.91 1.97e-06 8.61e-05
Smp_185170.1 SmLINC04318-IBu 0.91 1.71e-06 7.78e-05
Smp_185170.1 SmLINC04366-IBu 0.95 5.11e-08 6.85e-06
Smp_185170.1 SmLINC04395-IBu 0.93 1.99e-07 1.73e-05
Smp_185170.1 SmLINC04443-IBu 0.91 1.98e-06 8.66e-05
Smp_185170.1 SmLINC05023-IBu 0.90 4.60e-06 1.00e-04
Smp_185170.1 SmLINC05497-IBu 0.93 2.96e-07 2.28e-05
Smp_185170.1 SmLINC05572-IBu 0.94 1.58e-07 1.48e-05
Smp_185170.1 SmLINC05583-IBu 0.90 4.75e-06 1.00e-04
Smp_185170.1 SmLINC05586-IBu 0.92 7.98e-07 4.55e-05
Smp_185170.1 SmLINC05617-IBu 0.92 5.45e-07 3.49e-05
Smp_185170.1 SmLINC05716-IBu 0.95 3.68e-08 5.49e-06
Smp_185170.1 SmLINC05845-IBu 0.90 2.81e-06 1.00e-04
Smp_185170.1 SmLINC05875-IBu 0.91 2.30e-06 9.61e-05
Smp_185170.1 SmLINC05903-IBu 0.92 7.77e-07 4.47e-05
Smp_185170.1 SmLINC05925-IBu 0.93 3.76e-07 2.69e-05
Smp_185170.1 SmLINC05956-IBu 0.91 1.51e-06 7.14e-05
Smp_185170.1 SmLINC06336-IBu 0.92 7.96e-07 4.54e-05
Smp_185170.1 SmLINC06383-IBu 0.91 1.95e-06 8.55e-05
Smp_185170.1 SmLINC06424-IBu 0.93 4.44e-07 3.02e-05
Smp_185170.1 SmLINC06551-IBu 0.90 4.73e-06 1.00e-04
Smp_185170.1 SmLINC06561-IBu 0.92 9.60e-07 5.18e-05
Smp_185170.1 SmLINC06610-IBu 0.91 1.77e-06 7.99e-05
Smp_185170.1 SmLINC06741-IBu 0.92 6.24e-07 3.83e-05
Smp_185170.1 SmLINC06771-IBu 0.90 3.00e-06 1.00e-04
Smp_107590.1 Smp_185170.1 0.91 1.70e-06 7.76e-05
Smp_185170.1 Smp_110400.1 0.90 4.71e-06 1.00e-04
Smp_111340.6 Smp_185170.1 0.91 1.35e-06 6.61e-05
Smp_185170.1 Smp_111340.9 0.90 3.12e-06 1.00e-04
Smp_111640.1 Smp_185170.1 0.92 8.17e-07 4.62e-05
Smp_131830.1 Smp_185170.1 0.91 1.26e-06 6.30e-05
Smp_149750.1 Smp_185170.1 0.90 4.03e-06 1.00e-04
Smp_185170.1 Smp_184710.1 0.96 3.01e-09 1.03e-06
Smp_185830.1 Smp_185170.1 0.92 6.26e-07 3.84e-05
Smp_185170.1 Smp_201390.1 0.90 3.15e-06 1.00e-04
Smp_185170.1 Smp_203790.1 0.97 4.88e-10 3.22e-07
Smp_203920.1 Smp_185170.1 0.93 2.24e-07 1.88e-05
Smp_185170.1 Smp_204360.1 0.94 1.36e-07 1.33e-05
Smp_205450.1 Smp_185170.1 0.97 1.89e-10 1.75e-07
Smp_185170.1 Smp_205460.1 0.90 4.23e-06 1.00e-04
Smp_205480.1 Smp_185170.1 0.90 2.69e-06 1.00e-04
Smp_185170.1 Smp_205950.1 0.92 7.34e-07 4.29e-05