Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_159070.3 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00372-IBu 0 1.42 3.02 -1.83 -2.95
SmLINC01316-IBu 0 -0.35 0.57 -11.60 -4.95
SmLINC04430-IBu 0 1.35 4.06 1.40 0.01
SmLINC04947-IBu 0 -5.01 1.51 -1.96 -5.01
SmLINC05559-IBu 0 -0.72 2.59 -1.58 -1.98
SmLINC06490-IBu 0 -0.11 0.31 -3.82 -4.89
SmLINC06700-IBu 0 2.95 4.73 1.69 -0.46
SmLINC06836-IBu 0 5.91 8.23 0.00 0.00
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_159070.3 SmLINC00372-IBu 0.99 7.87e-13 5.14e-09
Smp_159070.3 SmLINC01316-IBu 0.91 1.69e-06 7.47e-05
Smp_159070.3 SmLINC04430-IBu 0.89 7.85e-06 2.00e-04
Smp_159070.3 SmLINC04947-IBu 0.90 2.70e-06 1.00e-04
Smp_159070.3 SmLINC05559-IBu 0.96 1.44e-08 2.73e-06
Smp_159070.3 SmLINC06490-IBu 0.81 2.00e-04 2.50e-03
Smp_159070.3 SmLINC06700-IBu 0.87 2.21e-05 4.00e-04
Smp_159070.3 SmLINC06836-IBu 0.97 5.46e-10 3.19e-07
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00192-IBu 0 0.61 2.35 -8.28 -4.07
SmLINC00194-IBu 0 7.19 10.94 6.02 3.20
SmLINC00195-IBu 0 2.69 5.95 0.00 0.00
SmLINC00372-IBu 0 1.42 3.02 -1.83 -2.95
SmLINC00513-IBu 0 6.74 8.35 0.00 3.11
SmLINC01002-IBu 0 3.82 5.68 -2.26 -2.26
SmLINC01077-IBu 0 2.08 4.52 -1.46 -0.43
SmLINC01316-IBu 0 -0.35 0.57 -11.60 -4.95
SmLINC01369-IBu 0 0.67 2.43 -5.36 -2.51
SmLINC01499-IBu 0 7.87 12.99 9.91 6.54
SmLINC01503-IBu 0 5.06 9.00 7.01 2.64
SmLINC02970-IBu 0 2.59 3.54 0.54 -1.36
SmLINC02974-IBu 0 4.39 7.22 4.18 3.33
SmLINC03132-IBu 0 3.76 4.91 1.54 -0.47
SmLINC03227-IBu 0 -1.25 0.94 -11.22 -11.22
SmLINC03739-IBu 0 0.68 2.57 -1.44 -2.85
SmLINC03924-IBu 0 0.69 2.22 -1.76 -2.59
SmLINC03953-IBu 0 1.67 3.25 -2.76 -1.08
SmLINC04003-IBu 0 -0.16 1.42 -3.63 -8.87
SmLINC04215-IBu 0 6.59 8.42 5.71 3.29
SmLINC04947-IBu 0 -5.01 1.51 -1.96 -5.01
SmLINC05559-IBu 0 -0.72 2.59 -1.58 -1.98
SmLINC06039-IBu 0 4.57 7.66 4.22 0.00
SmLINC06048-IBu 0 0.79 1.93 -4.19 -7.12
SmLINC06180-IBu 0 1.21 3.01 -2.19 -1.74
SmLINC06183-IBu 0 1.58 3.42 -7.62 -7.62
SmLINC06184-IBu 0 0.30 2.70 -7.31 -7.31
SmLINC06241-IBu 0 2.77 5.19 0.64 -7.79
SmLINC06836-IBu 0 5.91 8.23 0.00 0.00
SmLINC06839-IBu 0 -0.39 0.65 -6.55 -6.90
SmLINC06953-IBu 0 -0.76 1.41 -2.13 -3.45
SmLINC06960-IBu 0 -0.54 0.75 -5.12 -8.06
SmLINC07016-IBu 0 1.89 2.73 -4.50 -5.17
Smp_006830.2 0 -0.57 2.34 -5.80 -4.64
Smp_010140.2 0 7.72 10.83 -3.68 -3.68
Smp_011270.3 0 -0.96 1.19 -5.18 -3.39
Smp_014660.1 0 1.27 2.34 -5.37 -7.50
Smp_018590.1 0 0.89 1.74 -2.48 -5.97
Smp_018800.1 0 3.14 4.22 -2.08 -1.80
Smp_019260.2 0 0.65 2.01 -0.64 -4.31
Smp_019940.5 0 1.01 3.12 -6.73 1.95
Smp_027990.1 0 1.00 2.03 -4.13 -5.46
Smp_029940.1 0 0.49 2.88 -3.66 -1.65
Smp_031770.3 0 0.52 1.55 -9.48 -9.48
Smp_032120.1 0 0.03 1.02 -10.65 -10.65
Smp_033670.2 0 1.59 2.15 -4.87 -4.87
Smp_034840.1 0 12.23 13.88 0.00 0.00
Smp_035640.1 0 0.66 2.47 -3.45 -3.92
Smp_036270.3 0 1.18 2.21 -10.17 -10.17
Smp_036470.1 0 -1.93 1.42 -1.69 -3.55
Smp_038960.1 0 2.10 5.13 3.08 3.41
Smp_049600.3 0 1.80 2.94 -9.17 -1.90
Smp_052290.1 0 1.68 2.86 -1.36 -2.94
Smp_055420.1 0 -4.89 5.31 -4.89 -4.89
Smp_059340.3 0 0.76 1.23 -11.82 -11.82
Smp_059530.1 0 2.86 3.32 -11.10 -11.10
Smp_060190.4 0 -0.15 1.63 -8.76 -8.76
Smp_062070.1 0 9.47 10.97 6.18 8.79
Smp_069160.2 0 -0.02 1.03 -5.33 -4.92
Smp_075290.4 0 0.20 2.62 -2.13 -0.42
Smp_076040.2 0 -0.64 1.55 -9.83 -9.83
Smp_079260.1 0 1.54 2.23 -2.79 -3.15
Smp_084600.2 0 1.97 4.18 -1.81 0.75
Smp_084940.2 0 10.34 11.98 9.66 9.92
Smp_103540.1 0 11.43 12.63 8.84 9.65
Smp_106750.1 0 0.07 1.73 -5.83 -8.52
Smp_112520.1 0 1.59 3.68 -6.44 -6.44
Smp_112930.1 0 1.35 2.48 -6.71 -8.42
Smp_115510.1 0 0.70 2.56 -0.33 -4.70
Smp_120740.1 0 -0.36 1.05 -4.86 -4.75
Smp_123870.1 0 -0.64 -0.72 -4.74 -5.09
Smp_123920.1 0 2.53 6.35 1.54 1.49
Smp_126180.3 0 -0.43 3.15 -0.86 -6.29
Smp_126220.1 0 1.80 5.25 1.87 4.04
Smp_127790.1 0 -0.50 1.35 -1.97 -4.33
Smp_131300.1 0 1.18 2.14 -4.87 -2.56
Smp_132470.1 0 0.90 3.28 -5.62 -9.01
Smp_135010.1 0 0.82 3.18 -0.95 -2.30
Smp_136120.1 0 5.65 6.93 4.13 3.70
Smp_136720.1 0 1.63 4.13 -5.84 -3.55
Smp_138070.1 0 2.41 6.98 -1.44 3.23
Smp_138080.1 0 4.97 10.75 -3.79 3.75
Smp_139170.1 0 2.45 4.33 0.78 0.06
Smp_139940.1 0 3.07 4.50 -0.39 -2.02
Smp_141800.1 0 -3.07 0.09 -3.82 -7.51
Smp_143180.1 0 1.31 2.18 -4.27 -1.25
Smp_144120.1 0 1.28 2.86 -1.28 -2.28
Smp_144350.1 0 2.33 4.53 0.32 -0.03
Smp_145950.1 0 1.16 2.62 -4.07 -0.95
Smp_148110.1 0 1.60 3.38 -2.98 -3.24
Smp_149220.1 0 0.14 0.72 -3.31 -3.61
Smp_149870.1 0 0.08 0.15 -3.14 -8.77
Smp_151220.1 0 1.28 1.74 -3.16 -3.91
Smp_152540.1 0 3.53 6.32 3.87 4.18
Smp_152710.1 0 -0.74 0.72 -9.64 -9.64
Smp_152900.1 0 -0.24 0.96 -3.27 -3.63
Smp_153210.1 0 3.24 5.11 0.30 -0.00
Smp_153650.1 0 -0.02 1.72 -2.93 -3.55
Smp_155250.1 0 4.57 5.88 4.24 2.03
Smp_155690.1 0 0.49 1.13 -3.13 -4.07
Smp_156370.1 0 -1.21 3.29 0.78 0.34
Smp_156660.1 0 -0.02 3.03 0.95 -2.28
Smp_157280.1 0 4.32 5.40 2.85 1.60
Smp_158680.1 0 0.18 0.75 -3.19 -3.53
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48
Smp_159070.4 0 3.29 5.54 2.90 0.83
Smp_159150.1 0 12.28 13.98 12.38 11.81
Smp_159380.1 0 0.56 1.21 -4.02 -3.82
Smp_160670.1 0 1.07 2.08 -4.35 -3.20
Smp_163550.1 0 1.70 4.66 1.90 0.50
Smp_166530.1 0 0.50 3.97 -5.99 -5.99
Smp_174170.1 0 2.27 3.86 1.11 -0.90
Smp_174750.1 0 1.35 2.65 -1.87 -1.39
Smp_175290.1 0 2.94 5.17 0.92 0.51
Smp_175300.1 0 6.82 9.29 5.85 5.56
Smp_179740.1 0 1.00 3.85 0.39 0.86
Smp_180050.1 0 1.06 0.86 -2.29 -5.29
Smp_180630.1 0 0.12 1.09 -6.32 -9.26
Smp_184370.1 0 -1.11 0.66 -3.32 -4.28
Smp_184720.1 0 -1.57 1.46 -4.31 -4.31
Smp_188230.1 0 2.60 5.01 2.53 1.16
Smp_189180.2 0 -0.25 -0.54 -4.07 -4.89
Smp_190370.1 0 1.12 2.62 -1.76 -2.23
Smp_196410.1 0 0.98 1.80 -3.57 -2.94
Smp_200120.1 0 0.50 0.80 -8.32 -11.63
Smp_200520.1 0 2.06 7.02 3.71 4.93
Smp_201670.1 0 -0.73 1.64 -6.67 -6.67
Smp_202420.1 0 -0.06 2.13 -4.70 -1.89
Smp_205050.1 0 0.07 1.73 -5.83 -8.52
Smp_205590.1 0 0.00 6.18 0.00 0.00
Smp_212600.1 0 2.41 4.90 2.41 2.00

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_159070.3 SmLINC00192-IBu 0.91 1.68e-06 7.71e-05
Smp_159070.3 SmLINC00194-IBu 0.94 1.30e-07 1.30e-05
Smp_159070.3 SmLINC00195-IBu 0.93 5.06e-07 3.31e-05
Smp_159070.3 SmLINC00372-IBu 0.99 7.87e-13 5.71e-09
Smp_159070.3 SmLINC00513-IBu 0.94 1.20e-07 1.22e-05
Smp_159070.3 SmLINC01002-IBu 0.91 2.31e-06 9.64e-05
Smp_159070.3 SmLINC01077-IBu 0.96 2.68e-09 9.63e-07
Smp_159070.3 SmLINC01316-IBu 0.91 1.69e-06 7.74e-05
Smp_159070.3 SmLINC01369-IBu 0.92 9.90e-07 5.30e-05
Smp_159070.3 SmLINC01499-IBu 0.91 1.47e-06 7.01e-05
Smp_159070.3 SmLINC01503-IBu 0.90 3.79e-06 1.00e-04
Smp_159070.3 SmLINC02970-IBu 0.93 2.22e-07 1.87e-05
Smp_159070.3 SmLINC02974-IBu 0.95 5.07e-08 6.82e-06
Smp_159070.3 SmLINC03132-IBu 0.93 4.32e-07 2.97e-05
Smp_159070.3 SmLINC03227-IBu 0.94 8.00e-08 9.29e-06
Smp_159070.3 SmLINC03739-IBu 0.95 3.95e-08 5.75e-06
Smp_159070.3 SmLINC03924-IBu 0.92 1.17e-06 5.96e-05
Smp_159070.3 SmLINC03953-IBu 0.93 3.70e-07 2.66e-05
Smp_159070.3 SmLINC04003-IBu 0.95 3.43e-08 5.23e-06
Smp_159070.3 SmLINC04215-IBu 0.95 2.52e-08 4.24e-06
Smp_159070.3 SmLINC04947-IBu 0.90 2.70e-06 1.00e-04
Smp_159070.3 SmLINC05559-IBu 0.96 1.44e-08 2.92e-06
Smp_159070.3 SmLINC06039-IBu 0.91 2.51e-06 1.00e-04
Smp_159070.3 SmLINC06048-IBu 0.94 6.47e-08 8.05e-06
Smp_159070.3 SmLINC06180-IBu 0.97 3.63e-10 2.66e-07
Smp_159070.3 SmLINC06183-IBu 0.94 8.61e-08 9.77e-06
Smp_159070.3 SmLINC06184-IBu 0.97 1.35e-09 6.19e-07
Smp_159070.3 SmLINC06241-IBu 0.94 1.20e-07 1.22e-05
Smp_159070.3 SmLINC06836-IBu 0.97 5.46e-10 3.45e-07
Smp_159070.3 SmLINC06839-IBu 0.92 7.71e-07 4.44e-05
Smp_159070.3 SmLINC06953-IBu 0.94 1.33e-07 1.32e-05
Smp_159070.3 SmLINC06960-IBu 0.91 1.89e-06 8.35e-05
Smp_159070.3 SmLINC07016-IBu 0.90 4.29e-06 1.00e-04
Smp_006830.2 Smp_159070.3 0.96 1.23e-08 2.63e-06
Smp_010140.2 Smp_159070.3 0.90 2.77e-06 1.00e-04
Smp_159070.3 Smp_011270.3 0.97 1.86e-10 1.73e-07
Smp_159070.3 Smp_014660.1 0.98 1.83e-11 4.00e-08
Smp_018590.1 Smp_159070.3 0.92 6.64e-07 4.00e-05
Smp_159070.3 Smp_018800.1 0.97 2.61e-10 2.15e-07
Smp_159070.3 Smp_019260.2 0.95 1.98e-08 3.62e-06
Smp_019940.5 Smp_159070.3 0.90 4.36e-06 1.00e-04
Smp_027990.1 Smp_159070.3 0.96 1.25e-08 2.65e-06
Smp_029940.1 Smp_159070.3 0.96 9.98e-09 2.28e-06
Smp_159070.3 Smp_031770.3 0.95 4.20e-08 6.00e-06
Smp_159070.3 Smp_032120.1 0.97 7.23e-10 4.14e-07
Smp_159070.3 Smp_033670.2 0.95 5.50e-08 7.20e-06
Smp_159070.3 Smp_034840.1 0.92 7.23e-07 4.25e-05
Smp_159070.3 Smp_035640.1 0.93 3.56e-07 2.60e-05
Smp_159070.3 Smp_036270.3 0.93 3.15e-07 2.38e-05
Smp_159070.3 Smp_036470.1 0.92 1.09e-06 5.67e-05
Smp_159070.3 Smp_038960.1 0.91 1.48e-06 7.06e-05
Smp_049600.3 Smp_159070.3 0.96 4.43e-09 1.33e-06
Smp_159070.3 Smp_052290.1 0.97 1.22e-09 5.80e-07
Smp_055420.1 Smp_159070.3 0.91 1.23e-06 6.20e-05
Smp_159070.3 Smp_059340.3 0.90 2.70e-06 1.00e-04
Smp_059530.1 Smp_159070.3 0.90 2.82e-06 1.00e-04
Smp_060190.4 Smp_159070.3 0.98 1.47e-11 3.49e-08
Smp_159070.3 Smp_062070.1 0.94 8.55e-08 9.72e-06
Smp_159070.3 Smp_069160.2 0.92 6.37e-07 3.89e-05
Smp_159070.3 Smp_075290.4 0.97 6.92e-10 4.02e-07
Smp_159070.3 Smp_076040.2 0.98 2.72e-11 5.16e-08
Smp_079260.1 Smp_159070.3 0.91 2.30e-06 9.61e-05
Smp_084600.2 Smp_159070.3 0.91 2.15e-06 9.16e-05
Smp_159070.3 Smp_084940.2 0.93 2.10e-07 1.80e-05
Smp_103540.1 Smp_159070.3 0.93 1.95e-07 1.71e-05
Smp_106750.1 Smp_159070.3 0.91 1.41e-06 6.81e-05
Smp_159070.3 Smp_112520.1 0.93 2.70e-07 2.14e-05
Smp_159070.3 Smp_112930.1 0.92 8.93e-07 4.92e-05
Smp_115510.1 Smp_159070.3 0.97 1.56e-09 6.79e-07
Smp_120740.1 Smp_159070.3 0.96 1.20e-08 2.57e-06
Smp_159070.3 Smp_123870.1 0.95 3.21e-08 5.00e-06
Smp_123920.1 Smp_159070.3 0.95 5.56e-08 7.26e-06
Smp_126180.3 Smp_159070.3 0.91 1.73e-06 7.85e-05
Smp_126220.1 Smp_159070.3 0.90 3.51e-06 1.00e-04
Smp_127790.1 Smp_159070.3 0.94 1.05e-07 1.12e-05
Smp_131300.1 Smp_159070.3 0.91 1.86e-06 8.27e-05
Smp_159070.3 Smp_132470.1 0.98 7.93e-11 1.00e-07
Smp_159070.3 Smp_135010.1 0.97 2.49e-10 2.09e-07
Smp_136120.1 Smp_159070.3 0.93 2.62e-07 2.10e-05
Smp_159070.3 Smp_136720.1 0.98 1.47e-10 1.49e-07
Smp_159070.3 Smp_138070.1 0.91 2.22e-06 9.36e-05
Smp_138080.1 Smp_159070.3 0.90 2.96e-06 1.00e-04
Smp_159070.3 Smp_139170.1 0.96 2.96e-09 1.02e-06
Smp_159070.3 Smp_139940.1 0.98 8.43e-11 1.04e-07
Smp_159070.3 Smp_141800.1 0.92 1.03e-06 5.47e-05
Smp_143180.1 Smp_159070.3 0.91 1.63e-06 7.55e-05
Smp_159070.3 Smp_144120.1 0.94 1.35e-07 1.33e-05
Smp_159070.3 Smp_144350.1 0.98 2.51e-11 4.90e-08
Smp_145950.1 Smp_159070.3 0.96 7.07e-09 1.81e-06
Smp_159070.3 Smp_148110.1 0.98 8.02e-12 2.40e-08
Smp_159070.3 Smp_149220.1 0.90 4.37e-06 1.00e-04
Smp_149870.1 Smp_159070.3 0.94 7.70e-08 9.05e-06
Smp_159070.3 Smp_151220.1 0.91 1.26e-06 6.28e-05
Smp_159070.3 Smp_152540.1 0.94 1.37e-07 1.34e-05
Smp_152710.1 Smp_159070.3 0.92 6.46e-07 3.93e-05
Smp_159070.3 Smp_152900.1 0.92 6.73e-07 4.04e-05
Smp_159070.3 Smp_153210.1 0.96 3.03e-09 1.04e-06
Smp_153650.1 Smp_159070.3 0.96 3.23e-09 1.08e-06
Smp_159070.3 Smp_155250.1 0.93 4.05e-07 2.83e-05
Smp_159070.3 Smp_155690.1 0.95 2.26e-08 3.95e-06
Smp_159070.3 Smp_156370.1 0.90 4.65e-06 1.00e-04
Smp_159070.3 Smp_156660.1 0.93 2.21e-07 1.86e-05
Smp_157280.1 Smp_159070.3 0.92 1.11e-06 5.74e-05
Smp_159070.3 Smp_158680.1 0.94 6.51e-08 8.07e-06
Smp_159070.3 Smp_159070.4 0.95 3.29e-08 5.08e-06
Smp_159070.3 Smp_159150.1 0.90 2.74e-06 1.00e-04
Smp_159070.3 Smp_159380.1 0.93 5.01e-07 3.29e-05
Smp_159070.3 Smp_160670.1 0.97 1.32e-09 6.10e-07
Smp_159070.3 Smp_163550.1 0.95 4.41e-08 6.21e-06
Smp_166530.1 Smp_159070.3 0.92 5.62e-07 3.56e-05
Smp_174170.1 Smp_159070.3 0.96 7.54e-09 1.89e-06
Smp_174750.1 Smp_159070.3 0.91 1.35e-06 6.62e-05
Smp_175290.1 Smp_159070.3 0.96 4.12e-09 1.27e-06
Smp_159070.3 Smp_175300.1 0.95 1.72e-08 3.28e-06
Smp_159070.3 Smp_179740.1 0.96 9.63e-09 2.22e-06
Smp_159070.3 Smp_180050.1 0.93 3.30e-07 2.46e-05
Smp_180630.1 Smp_159070.3 0.92 6.73e-07 4.04e-05
Smp_159070.3 Smp_184370.1 0.96 6.53e-09 1.72e-06
Smp_184720.1 Smp_159070.3 0.90 4.30e-06 1.00e-04
Smp_159070.3 Smp_188230.1 0.97 1.63e-09 6.97e-07
Smp_189180.2 Smp_159070.3 0.91 1.76e-06 7.96e-05
Smp_159070.3 Smp_190370.1 0.96 9.06e-09 2.13e-06
Smp_196410.1 Smp_159070.3 0.94 1.38e-07 1.35e-05
Smp_200120.1 Smp_159070.3 0.91 1.38e-06 6.70e-05
Smp_200520.1 Smp_159070.3 0.91 1.26e-06 6.30e-05
Smp_159070.3 Smp_201670.1 0.94 1.89e-07 1.67e-05
Smp_159070.3 Smp_202420.1 0.90 4.56e-06 1.00e-04
Smp_205050.1 Smp_159070.3 0.91 1.41e-06 6.81e-05
Smp_159070.3 Smp_205590.1 0.90 3.32e-06 1.00e-04
Smp_159070.3 Smp_212600.1 0.95 5.42e-08 7.13e-06