Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_149670.1 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC02255-IBu 0 -0.86 -1.80 -3.72 -4.71
SmLINC02630-IBu 0 -0.86 -1.66 -4.03 -11.09
SmLINC02657-IBu 0 -0.90 -1.95 -11.76 -11.76
SmLINC02678-IBu 0 -3.18 -2.40 -3.22 -5.56
SmLINC02888-IBu 0 -1.98 -4.28 -4.50 -5.76
SmLINC05989-IBu 0 -1.59 -3.64 -6.05 -6.59
SmLINC06128-IBu 0 -1.91 -4.82 -10.42 -10.44
SmLINC06903-IBu 0 -1.36 -4.25 -5.91 -3.41
Smp_149670.1 0 -1.98 -3.69 -10.45 -9.35

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_149670.1 SmLINC02255-IBu 0.88 1.01e-05 2.00e-04
Smp_149670.1 SmLINC02630-IBu 0.87 1.62e-05 3.00e-04
Smp_149670.1 SmLINC02657-IBu 0.83 9.37e-05 1.30e-03
Smp_149670.1 SmLINC02678-IBu 0.88 1.44e-05 3.00e-04
Smp_149670.1 SmLINC02888-IBu 0.85 5.09e-05 8.00e-04
Smp_149670.1 SmLINC05989-IBu 0.92 5.74e-07 3.46e-05
Smp_149670.1 SmLINC06128-IBu 0.96 3.93e-09 1.15e-06
Smp_149670.1 SmLINC06903-IBu 0.83 1.00e-04 1.50e-03
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00565-IBu 0 -1.33 -5.82 -10.51 -4.87
SmLINC00998-IBu 0 -1.77 -2.82 -9.23 -9.23
SmLINC01234-IBu 0 -1.15 -2.33 -5.84 -5.11
SmLINC01707-IBu 0 -1.39 -3.43 -3.89 -3.93
SmLINC02325-IBu 0 -1.21 -1.93 -6.00 -7.20
SmLINC05989-IBu 0 -1.59 -3.64 -6.05 -6.59
SmLINC06128-IBu 0 -1.91 -4.82 -10.42 -10.44
SmLINC06240-IBu 0 -1.33 -10.34 -6.03 -6.09
SmLINC06405-IBu 0 -1.11 -2.49 -5.22 -6.11
SmLINC06441-IBu 0 -0.94 -2.22 -5.00 -6.40
SmLINC07001-IBu 0 -1.21 -2.11 -6.65 -6.97
Smp_002930.1 0 -1.91 -4.36 -9.53 -9.53
Smp_003770.1 0 -2.73 -3.76 -4.30 -3.65
Smp_005860.1 0 -1.88 -5.14 -8.12 -7.71
Smp_006560.1 0 -3.55 -6.46 -6.31 -5.44
Smp_009310.2 0 -1.22 -1.84 -5.37 -4.70
Smp_014400.3 0 -1.41 -3.60 -7.89 -6.71
Smp_014400.5 0 -2.15 -4.06 -6.32 -9.42
Smp_018880.1 0 -2.71 -8.49 -10.03 -6.16
Smp_019750.2 0 -2.70 -5.17 -4.10 -4.19
Smp_021730.1 0 -2.52 -3.78 -4.00 -3.90
Smp_022430.1 0 -3.19 -4.81 -4.61 -4.50
Smp_028990.2 0 -2.03 -4.85 -4.73 -6.76
Smp_030500.1 0 -2.77 -6.42 -6.74 -6.44
Smp_033610.1 0 -2.04 -4.32 -5.07 -4.63
Smp_035090.2 0 -1.41 -2.69 -14.78 -14.86
Smp_035310.1 0 -1.02 -2.20 -5.71 -5.71
Smp_038100.1 0 -2.11 -3.55 -4.08 -3.42
Smp_042160.1 0 -2.29 -5.11 -4.28 -4.75
Smp_050830.1 0 -1.69 -2.62 -4.49 -4.19
Smp_051230.3 0 -1.49 -4.66 -6.27 -4.15
Smp_052060.1 0 -2.31 -3.14 -4.09 -3.50
Smp_055210.1 0 -1.70 -3.76 -4.03 -3.39
Smp_057060.1 0 -3.71 -5.93 -6.06 -6.08
Smp_057790.1 0 -3.82 -7.29 -4.86 -7.43
Smp_061870.1 0 -2.53 -4.47 -5.29 -5.38
Smp_063090.1 0 -2.16 -4.16 -3.57 -3.93
Smp_071050.1 0 1.37 1.31 3.40 4.43
Smp_074570.1 0 -1.85 -4.23 -8.15 -8.27
Smp_079220.1 0 -2.48 -4.55 -6.52 -5.99
Smp_083720.1 0 -2.37 -5.50 -6.31 -5.77
Smp_092320.1 0 -1.82 -3.08 -5.42 -5.28
Smp_092880.2 0 -1.50 -1.62 -3.72 -5.02
Smp_097750.1 0 -1.63 -3.99 -4.48 -3.56
Smp_099670.1 0 -3.51 -4.19 -5.26 -6.78
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_106390.1 0 -2.35 -4.90 -10.78 -6.23
Smp_108050.1 0 -2.06 -3.07 -8.81 -9.10
Smp_110400.3 0 -1.47 -2.30 -8.95 -9.88
Smp_114910.1 0 -3.08 -7.52 -7.91 -7.70
Smp_119050.1 0 -1.30 -4.96 -4.14 -6.99
Smp_120920.3 0 -1.87 -3.40 -3.67 -4.06
Smp_125090.1 0 -1.49 -2.90 -8.82 -8.63
Smp_133310.1 0 -1.74 -4.20 -4.35 -4.73
Smp_134410.1 0 -2.22 -3.88 -6.81 -12.78
Smp_145340.1 0 -2.62 -9.51 -6.28 -7.06
Smp_145710.1 0 -1.79 -2.79 -7.90 -7.78
Smp_145810.2 0 -1.83 -3.47 -4.75 -10.08
Smp_149670.1 0 -1.98 -3.69 -10.45 -9.35
Smp_152260.1 0 -3.17 -4.39 -4.03 -4.71
Smp_154020.1 0 -1.89 -2.51 -3.88 -5.45
Smp_157310.1 0 -3.02 -6.78 -4.07 -5.91
Smp_159900.1 0 -1.03 -2.21 -4.34 -4.82
Smp_162370.1 0 -1.45 -4.56 -9.04 -5.93
Smp_166950.1 0 -1.86 -2.33 -5.56 -4.94
Smp_167710.1 0 -1.15 -3.10 -9.21 -8.94
Smp_168380.1 0 -1.89 -2.82 -9.66 -9.66
Smp_169190.1 0 -3.08 -5.99 -19.20 -16.89
Smp_179270.1 0 -1.07 -3.21 -9.00 -8.54
Smp_179640.1 0 -2.62 -9.51 -6.28 -7.06
Smp_182770.1 0 -1.46 -4.03 -8.25 -8.62
Smp_182880.1 0 -2.14 -2.31 -8.86 -9.55
Smp_182910.1 0 -1.24 -2.03 -6.37 -6.64
Smp_183420.1 0 -2.62 -9.51 -6.28 -7.06
Smp_184460.1 0 -2.24 -5.26 -13.63 -13.63
Smp_184750.1 0 -1.93 -3.13 -4.74 -4.46
Smp_185180.1 0 -1.60 -2.75 -5.44 -6.67
Smp_185220.1 0 -1.31 -3.59 -4.11 -4.96
Smp_185360.1 0 -2.43 -5.85 -12.83 -12.83
Smp_187350.1 0 -1.35 -2.38 -8.77 -9.63
Smp_188900.1 0 -1.35 -4.02 -11.76 -11.76
Smp_194000.1 0 -1.48 -1.97 -6.64 -8.23
Smp_194040.1 0 -2.17 -6.63 -5.72 -6.95
Smp_194770.1 0 -2.35 -7.85 -7.77 -7.92
Smp_195160.1 0 -1.78 -3.62 -7.03 -7.47
Smp_197110.1 0 -1.94 -2.50 -4.24 -4.44
Smp_205080.1 0 -1.33 -0.97 -6.34 -7.04

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_149670.1 SmLINC00565-IBu 0.93 2.08e-07 1.79e-05
Smp_149670.1 SmLINC00998-IBu 0.94 1.27e-07 1.27e-05
Smp_149670.1 SmLINC01234-IBu 0.90 4.63e-06 1.00e-04
Smp_149670.1 SmLINC01707-IBu 0.90 4.21e-06 1.00e-04
Smp_149670.1 SmLINC02325-IBu 0.92 1.06e-06 5.59e-05
Smp_149670.1 SmLINC05989-IBu 0.92 5.74e-07 3.61e-05
Smp_149670.1 SmLINC06128-IBu 0.96 3.93e-09 1.23e-06
Smp_149670.1 SmLINC06240-IBu 0.91 2.32e-06 9.65e-05
Smp_149670.1 SmLINC06405-IBu 0.93 2.78e-07 2.18e-05
Smp_149670.1 SmLINC06441-IBu 0.90 4.24e-06 1.00e-04
Smp_149670.1 SmLINC07001-IBu 0.91 1.93e-06 8.48e-05
Smp_149670.1 Smp_002930.1 0.94 1.33e-07 1.31e-05
Smp_003770.1 Smp_149670.1 0.94 1.38e-07 1.35e-05
Smp_149670.1 Smp_005860.1 0.96 3.73e-09 1.19e-06
Smp_149670.1 Smp_006560.1 0.92 1.15e-06 5.90e-05
Smp_009310.2 Smp_149670.1 0.92 6.99e-07 4.15e-05
Smp_149670.1 Smp_014400.3 0.90 2.96e-06 1.00e-04
Smp_014400.5 Smp_149670.1 0.96 2.51e-09 9.22e-07
Smp_149670.1 Smp_018880.1 0.95 1.75e-08 3.32e-06
Smp_149670.1 Smp_019750.2 0.95 4.22e-08 6.02e-06
Smp_149670.1 Smp_021730.1 0.94 1.52e-07 1.44e-05
Smp_149670.1 Smp_022430.1 0.91 1.63e-06 7.54e-05
Smp_149670.1 Smp_028990.2 0.95 2.93e-08 4.70e-06
Smp_030500.1 Smp_149670.1 0.93 4.21e-07 2.91e-05
Smp_149670.1 Smp_033610.1 0.96 5.44e-09 1.52e-06
Smp_149670.1 Smp_035090.2 0.93 4.07e-07 2.85e-05
Smp_149670.1 Smp_035310.1 0.92 5.94e-07 3.70e-05
Smp_149670.1 Smp_038100.1 0.93 3.72e-07 2.67e-05
Smp_042160.1 Smp_149670.1 0.92 1.03e-06 5.45e-05
Smp_149670.1 Smp_050830.1 0.91 1.69e-06 7.74e-05
Smp_149670.1 Smp_051230.3 0.94 1.00e-07 1.08e-05
Smp_149670.1 Smp_052060.1 0.96 4.57e-09 1.36e-06
Smp_055210.1 Smp_149670.1 0.97 3.77e-10 2.73e-07
Smp_149670.1 Smp_057060.1 0.92 1.10e-06 5.71e-05
Smp_149670.1 Smp_057790.1 0.90 2.77e-06 1.00e-04
Smp_061870.1 Smp_149670.1 0.94 6.28e-08 7.88e-06
Smp_063090.1 Smp_149670.1 0.91 1.90e-06 8.41e-05
Smp_071050.1 Smp_149670.1 -0.90 2.85e-06 1.00e-04
Smp_149670.1 Smp_074570.1 0.95 1.99e-08 3.62e-06
Smp_149670.1 Smp_079220.1 0.95 3.23e-08 5.02e-06
Smp_083720.1 Smp_149670.1 0.92 6.57e-07 3.97e-05
Smp_092320.1 Smp_149670.1 0.94 1.06e-07 1.12e-05
Smp_149670.1 Smp_092880.2 0.93 5.01e-07 3.29e-05
Smp_097750.1 Smp_149670.1 0.98 1.47e-10 1.49e-07
Smp_149670.1 Smp_099670.1 0.91 2.14e-06 9.12e-05
Smp_102670.1 Smp_149670.1 0.93 2.02e-07 1.75e-05
Smp_106390.1 Smp_149670.1 0.95 3.71e-08 5.52e-06
Smp_149670.1 Smp_108050.1 0.98 2.22e-11 4.53e-08
Smp_110400.3 Smp_149670.1 0.95 3.94e-08 5.74e-06
Smp_149670.1 Smp_114910.1 0.93 3.93e-07 2.78e-05
Smp_149670.1 Smp_119050.1 0.91 1.73e-06 7.85e-05
Smp_149670.1 Smp_120920.3 0.95 2.78e-08 4.53e-06
Smp_125090.1 Smp_149670.1 0.94 1.59e-07 1.49e-05
Smp_133310.1 Smp_149670.1 0.95 3.65e-08 5.46e-06
Smp_149670.1 Smp_134410.1 0.96 4.87e-09 1.42e-06
Smp_149670.1 Smp_145340.1 0.92 1.17e-06 5.96e-05
Smp_145710.1 Smp_149670.1 0.96 9.52e-09 2.21e-06
Smp_149670.1 Smp_145810.2 0.93 3.69e-07 2.66e-05
Smp_152260.1 Smp_149670.1 0.90 2.76e-06 1.00e-04
Smp_149670.1 Smp_154020.1 0.98 1.52e-10 1.52e-07
Smp_149670.1 Smp_157310.1 0.91 1.50e-06 7.10e-05
Smp_149670.1 Smp_159900.1 0.94 1.86e-07 1.65e-05
Smp_149670.1 Smp_162370.1 0.94 1.74e-07 1.58e-05
Smp_166950.1 Smp_149670.1 0.95 2.82e-08 4.58e-06
Smp_149670.1 Smp_167710.1 0.91 2.31e-06 9.63e-05
Smp_168380.1 Smp_149670.1 0.93 2.93e-07 2.27e-05
Smp_149670.1 Smp_169190.1 0.92 7.18e-07 4.23e-05
Smp_179270.1 Smp_149670.1 0.91 2.35e-06 9.75e-05
Smp_149670.1 Smp_179640.1 0.92 1.17e-06 5.96e-05
Smp_149670.1 Smp_182770.1 0.95 2.08e-08 3.73e-06
Smp_182880.1 Smp_149670.1 0.93 2.50e-07 2.03e-05
Smp_149670.1 Smp_182910.1 0.94 1.60e-07 1.49e-05
Smp_149670.1 Smp_183420.1 0.92 1.17e-06 5.96e-05
Smp_149670.1 Smp_184460.1 0.90 4.34e-06 1.00e-04
Smp_149670.1 Smp_184750.1 0.98 4.65e-12 1.72e-08
Smp_185180.1 Smp_149670.1 0.97 3.24e-10 2.48e-07
Smp_185220.1 Smp_149670.1 0.94 1.06e-07 1.13e-05
Smp_149670.1 Smp_185360.1 0.92 5.89e-07 3.68e-05
Smp_149670.1 Smp_187350.1 0.90 3.29e-06 1.00e-04
Smp_149670.1 Smp_188900.1 0.92 1.16e-06 5.93e-05
Smp_149670.1 Smp_194000.1 0.93 2.14e-07 1.82e-05
Smp_149670.1 Smp_194040.1 0.91 1.59e-06 7.42e-05
Smp_149670.1 Smp_194770.1 0.91 2.51e-06 1.00e-04
Smp_149670.1 Smp_195160.1 0.97 1.03e-09 5.22e-07
Smp_149670.1 Smp_197110.1 0.93 2.40e-07 1.97e-05
Smp_149670.1 Smp_205080.1 0.92 8.75e-07 4.85e-05