This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, VinÃcius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.
Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.
Gene ID | Cerc | 3S | 24S | Male | Female |
---|---|---|---|---|---|
SmLINC02678-IBu | 0 | -3.18 | -2.40 | -3.22 | -5.56 |
SmLINC04957-IBu | 0 | -2.62 | -5.90 | -3.92 | -7.44 |
SmLINC05989-IBu | 0 | -1.59 | -3.64 | -6.05 | -6.59 |
SmLINC06128-IBu | 0 | -1.91 | -4.82 | -10.42 | -10.44 |
SmLINC06890-IBu | 0 | -2.18 | -6.70 | -7.95 | -9.08 |
SmLINC06903-IBu | 0 | -1.36 | -4.25 | -5.91 | -3.41 |
Smp_093930.1 | 0 | -2.05 | -2.86 | -4.42 | -6.13 |
Compared Gene | Gene | Pearson Correlation Value | p-value | B.-H. adjusted p-value |
---|---|---|---|---|
Smp_093930.1 | SmLINC02678-IBu | 0.80 | 2.00e-04 | 2.80e-03 |
Smp_093930.1 | SmLINC04957-IBu | 0.82 | 1.00e-04 | 1.80e-03 |
Smp_093930.1 | SmLINC05989-IBu | 0.89 | 8.14e-06 | 2.00e-04 |
Smp_093930.1 | SmLINC06128-IBu | 0.89 | 7.92e-06 | 2.00e-04 |
Smp_093930.1 | SmLINC06890-IBu | 0.86 | 3.33e-05 | 6.00e-04 |
Smp_093930.1 | SmLINC06903-IBu | 0.84 | 7.05e-05 | 1.00e-03 |
Gene ID | Cerc | 3S | 24S | Male | Female |
---|---|---|---|---|---|
Smp_093930.1 | 0 | -2.05 | -2.86 | -4.42 | -6.13 |
Smp_167680.1 | 0 | -1.95 | -2.65 | -4.96 | -10.61 |
Compared Gene | Gene | Pearson Correlation Value | p-value | B.-H. adjusted p-value |
---|---|---|---|---|
Smp_093930.1 | Smp_167680.1 | 0.93 | 2.23e-07 | 1.88e-05 |