Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_060900.2 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC02630-IBu 0 -0.86 -1.66 -4.03 -11.09
SmLINC02678-IBu 0 -3.18 -2.40 -3.22 -5.56
SmLINC02888-IBu 0 -1.98 -4.28 -4.50 -5.76
SmLINC06128-IBu 0 -1.91 -4.82 -10.42 -10.44
Smp_060900.2 0 -2.06 -2.01 -4.40 -5.14

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_060900.2 SmLINC02630-IBu 0.80 3.00e-04 3.20e-03
Smp_060900.2 SmLINC02678-IBu 0.90 3.37e-06 1.00e-04
Smp_060900.2 SmLINC02888-IBu 0.84 8.00e-05 1.20e-03
Smp_060900.2 SmLINC06128-IBu 0.83 1.00e-04 1.50e-03