Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_032120.1 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00372-IBu 0 1.42 3.02 -1.83 -2.95
SmLINC01316-IBu 0 -0.35 0.57 -11.60 -4.95
SmLINC02646-IBu 0 0.70 0.79 -6.84 -2.55
SmLINC04430-IBu 0 1.35 4.06 1.40 0.01
SmLINC04947-IBu 0 -5.01 1.51 -1.96 -5.01
SmLINC05559-IBu 0 -0.72 2.59 -1.58 -1.98
SmLINC06490-IBu 0 -0.11 0.31 -3.82 -4.89
SmLINC06646-IBu 0 1.59 1.70 -7.49 -7.49
SmLINC06700-IBu 0 2.95 4.73 1.69 -0.46
SmLINC06836-IBu 0 5.91 8.23 0.00 0.00
Smp_032120.1 0 0.03 1.02 -10.65 -10.65

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_032120.1 SmLINC00372-IBu 0.98 3.60e-11 5.59e-08
Smp_032120.1 SmLINC01316-IBu 0.92 9.73e-07 5.03e-05
Smp_032120.1 SmLINC02646-IBu 0.84 6.04e-05 9.00e-04
Smp_032120.1 SmLINC04430-IBu 0.88 1.24e-05 3.00e-04
Smp_032120.1 SmLINC04947-IBu 0.84 7.55e-05 1.10e-03
Smp_032120.1 SmLINC05559-IBu 0.93 2.11e-07 1.72e-05
Smp_032120.1 SmLINC06490-IBu 0.80 3.00e-04 3.20e-03
Smp_032120.1 SmLINC06646-IBu 0.83 1.00e-04 1.40e-03
Smp_032120.1 SmLINC06700-IBu 0.93 4.76e-07 3.04e-05
Smp_032120.1 SmLINC06836-IBu 0.97 3.26e-10 2.29e-07
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00192-IBu 0 0.61 2.35 -8.28 -4.07
SmLINC00194-IBu 0 7.19 10.94 6.02 3.20
SmLINC00372-IBu 0 1.42 3.02 -1.83 -2.95
SmLINC00513-IBu 0 6.74 8.35 0.00 3.11
SmLINC00781-IBu 0 6.19 6.44 3.58 2.95
SmLINC01002-IBu 0 3.82 5.68 -2.26 -2.26
SmLINC01077-IBu 0 2.08 4.52 -1.46 -0.43
SmLINC01316-IBu 0 -0.35 0.57 -11.60 -4.95
SmLINC01369-IBu 0 0.67 2.43 -5.36 -2.51
SmLINC02626-IBu 0 8.15 9.29 3.73 6.59
SmLINC02970-IBu 0 2.59 3.54 0.54 -1.36
SmLINC02974-IBu 0 4.39 7.22 4.18 3.33
SmLINC03132-IBu 0 3.76 4.91 1.54 -0.47
SmLINC03227-IBu 0 -1.25 0.94 -11.22 -11.22
SmLINC03739-IBu 0 0.68 2.57 -1.44 -2.85
SmLINC03924-IBu 0 0.69 2.22 -1.76 -2.59
SmLINC03953-IBu 0 1.67 3.25 -2.76 -1.08
SmLINC04003-IBu 0 -0.16 1.42 -3.63 -8.87
SmLINC04215-IBu 0 6.59 8.42 5.71 3.29
SmLINC05348-IBu 0 -0.21 0.48 -2.93 -5.35
SmLINC05559-IBu 0 -0.72 2.59 -1.58 -1.98
SmLINC06048-IBu 0 0.79 1.93 -4.19 -7.12
SmLINC06180-IBu 0 1.21 3.01 -2.19 -1.74
SmLINC06183-IBu 0 1.58 3.42 -7.62 -7.62
SmLINC06184-IBu 0 0.30 2.70 -7.31 -7.31
SmLINC06241-IBu 0 2.77 5.19 0.64 -7.79
SmLINC06700-IBu 0 2.95 4.73 1.69 -0.46
SmLINC06836-IBu 0 5.91 8.23 0.00 0.00
SmLINC06839-IBu 0 -0.39 0.65 -6.55 -6.90
SmLINC06953-IBu 0 -0.76 1.41 -2.13 -3.45
Smp_006830.2 0 -0.57 2.34 -5.80 -4.64
Smp_008910.1 0 -1.29 0.24 -6.54 -6.54
Smp_011270.3 0 -0.96 1.19 -5.18 -3.39
Smp_014660.1 0 1.27 2.34 -5.37 -7.50
Smp_017650.1 0 9.51 10.68 -7.98 0.00
Smp_018590.1 0 0.89 1.74 -2.48 -5.97
Smp_018800.1 0 3.14 4.22 -2.08 -1.80
Smp_019260.2 0 0.65 2.01 -0.64 -4.31
Smp_019940.5 0 1.01 3.12 -6.73 1.95
Smp_021340.3 0 9.76 11.05 9.34 9.26
Smp_024820.1 0 4.10 4.75 1.46 1.82
Smp_027990.1 0 1.00 2.03 -4.13 -5.46
Smp_029940.1 0 0.49 2.88 -3.66 -1.65
Smp_031770.3 0 0.52 1.55 -9.48 -9.48
Smp_032120.1 0 0.03 1.02 -10.65 -10.65
Smp_032320.2 0 -0.17 0.68 -9.42 -9.42
Smp_033670.2 0 1.59 2.15 -4.87 -4.87
Smp_034840.1 0 12.23 13.88 0.00 0.00
Smp_035200.2 0 2.64 4.29 0.34 1.53
Smp_036270.3 0 1.18 2.21 -10.17 -10.17
Smp_049600.3 0 1.80 2.94 -9.17 -1.90
Smp_052290.1 0 1.68 2.86 -1.36 -2.94
Smp_059340.3 0 0.76 1.23 -11.82 -11.82
Smp_059530.1 0 2.86 3.32 -11.10 -11.10
Smp_060190.4 0 -0.15 1.63 -8.76 -8.76
Smp_062070.1 0 9.47 10.97 6.18 8.79
Smp_062610.2 0 -1.05 -0.32 -6.81 -10.38
Smp_063650.3 0 8.82 10.72 0.00 0.00
Smp_075290.4 0 0.20 2.62 -2.13 -0.42
Smp_076040.2 0 -0.64 1.55 -9.83 -9.83
Smp_079260.1 0 1.54 2.23 -2.79 -3.15
Smp_083380.2 0 9.13 10.31 0.00 0.00
Smp_084940.2 0 10.34 11.98 9.66 9.92
Smp_098370.1 0 9.63 11.25 6.43 9.48
Smp_099160.4 0 11.96 13.30 11.03 12.32
Smp_099560.1 0 8.15 8.89 -2.27 -2.27
Smp_103540.1 0 11.43 12.63 8.84 9.65
Smp_103930.1 0 0.87 2.20 -7.48 0.71
Smp_106750.1 0 0.07 1.73 -5.83 -8.52
Smp_112520.1 0 1.59 3.68 -6.44 -6.44
Smp_112930.1 0 1.35 2.48 -6.71 -8.42
Smp_115510.1 0 0.70 2.56 -0.33 -4.70
Smp_118960.1 0 -0.29 0.29 -8.48 -0.88
Smp_120740.1 0 -0.36 1.05 -4.86 -4.75
Smp_123870.1 0 -0.64 -0.72 -4.74 -5.09
Smp_123920.1 0 2.53 6.35 1.54 1.49
Smp_126560.1 0 1.05 1.45 -4.09 -4.98
Smp_132470.1 0 0.90 3.28 -5.62 -9.01
Smp_135010.1 0 0.82 3.18 -0.95 -2.30
Smp_136120.1 0 5.65 6.93 4.13 3.70
Smp_136720.1 0 1.63 4.13 -5.84 -3.55
Smp_138140.1 0 2.02 2.69 -3.31 -2.76
Smp_139170.1 0 2.45 4.33 0.78 0.06
Smp_139940.1 0 3.07 4.50 -0.39 -2.02
Smp_142980.1 0 0.95 0.31 -2.54 -3.71
Smp_143180.1 0 1.31 2.18 -4.27 -1.25
Smp_144120.1 0 1.28 2.86 -1.28 -2.28
Smp_144350.1 0 2.33 4.53 0.32 -0.03
Smp_145950.1 0 1.16 2.62 -4.07 -0.95
Smp_146920.1 0 0.99 1.37 -7.20 -7.20
Smp_148110.1 0 1.60 3.38 -2.98 -3.24
Smp_149220.1 0 0.14 0.72 -3.31 -3.61
Smp_149870.1 0 0.08 0.15 -3.14 -8.77
Smp_151220.1 0 1.28 1.74 -3.16 -3.91
Smp_152540.1 0 3.53 6.32 3.87 4.18
Smp_152900.1 0 -0.24 0.96 -3.27 -3.63
Smp_153210.1 0 3.24 5.11 0.30 -0.00
Smp_153650.1 0 -0.02 1.72 -2.93 -3.55
Smp_155250.1 0 4.57 5.88 4.24 2.03
Smp_155690.1 0 0.49 1.13 -3.13 -4.07
Smp_157270.1 0 3.45 4.02 -0.36 -1.80
Smp_157280.1 0 4.32 5.40 2.85 1.60
Smp_158680.1 0 0.18 0.75 -3.19 -3.53
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48
Smp_159070.4 0 3.29 5.54 2.90 0.83
Smp_159150.1 0 12.28 13.98 12.38 11.81
Smp_159380.1 0 0.56 1.21 -4.02 -3.82
Smp_160670.1 0 1.07 2.08 -4.35 -3.20
Smp_161270.1 0 1.27 1.64 -8.43 -8.43
Smp_161280.1 0 1.17 1.48 -9.00 -4.95
Smp_163550.1 0 1.70 4.66 1.90 0.50
Smp_169500.1 0 1.36 1.90 -2.93 -5.45
Smp_171420.1 0 2.93 4.14 1.74 -0.67
Smp_174170.1 0 2.27 3.86 1.11 -0.90
Smp_174750.1 0 1.35 2.65 -1.87 -1.39
Smp_175290.1 0 2.94 5.17 0.92 0.51
Smp_175300.1 0 6.82 9.29 5.85 5.56
Smp_179740.1 0 1.00 3.85 0.39 0.86
Smp_180050.1 0 1.06 0.86 -2.29 -5.29
Smp_180630.1 0 0.12 1.09 -6.32 -9.26
Smp_184370.1 0 -1.11 0.66 -3.32 -4.28
Smp_188230.1 0 2.60 5.01 2.53 1.16
Smp_189180.2 0 -0.25 -0.54 -4.07 -4.89
Smp_190370.1 0 1.12 2.62 -1.76 -2.23
Smp_194110.1 0 0.85 0.42 -9.97 -9.97
Smp_194140.1 0 0.06 0.11 -9.88 -9.88
Smp_196410.1 0 0.98 1.80 -3.57 -2.94
Smp_200120.1 0 0.50 0.80 -8.32 -11.63
Smp_200810.1 0 1.79 3.97 -0.86 -1.95
Smp_201670.1 0 -0.73 1.64 -6.67 -6.67
Smp_205050.1 0 0.07 1.73 -5.83 -8.52
Smp_212600.1 0 2.41 4.90 2.41 2.00

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_032120.1 SmLINC00192-IBu 0.90 3.98e-06 1.00e-04
Smp_032120.1 SmLINC00194-IBu 0.91 1.98e-06 8.64e-05
Smp_032120.1 SmLINC00372-IBu 0.98 3.60e-11 6.14e-08
Smp_032120.1 SmLINC00513-IBu 0.96 2.80e-09 9.90e-07
Smp_032120.1 SmLINC00781-IBu 0.91 1.26e-06 6.31e-05
Smp_032120.1 SmLINC01002-IBu 0.94 9.32e-08 1.03e-05
Smp_032120.1 SmLINC01077-IBu 0.93 3.05e-07 2.33e-05
Smp_032120.1 SmLINC01316-IBu 0.92 9.73e-07 5.23e-05
Smp_032120.1 SmLINC01369-IBu 0.90 4.65e-06 1.00e-04
Smp_032120.1 SmLINC02626-IBu 0.92 1.04e-06 5.51e-05
Smp_032120.1 SmLINC02970-IBu 0.96 1.40e-08 2.87e-06
Smp_032120.1 SmLINC02974-IBu 0.92 7.12e-07 4.20e-05
Smp_032120.1 SmLINC03132-IBu 0.97 1.79e-09 7.39e-07
Smp_032120.1 SmLINC03227-IBu 0.95 1.96e-08 3.59e-06
Smp_032120.1 SmLINC03739-IBu 0.91 1.91e-06 8.44e-05
Smp_032120.1 SmLINC03924-IBu 0.92 1.07e-06 5.61e-05
Smp_032120.1 SmLINC03953-IBu 0.95 3.37e-08 5.17e-06
Smp_032120.1 SmLINC04003-IBu 0.90 3.06e-06 1.00e-04
Smp_032120.1 SmLINC04215-IBu 0.96 6.95e-09 1.79e-06
Smp_032120.1 SmLINC05348-IBu 0.93 4.15e-07 2.89e-05
Smp_032120.1 SmLINC05559-IBu 0.93 2.11e-07 1.80e-05
Smp_032120.1 SmLINC06048-IBu 0.97 6.58e-10 3.89e-07
Smp_032120.1 SmLINC06180-IBu 0.92 8.89e-07 4.91e-05
Smp_032120.1 SmLINC06183-IBu 0.91 1.48e-06 7.05e-05
Smp_032120.1 SmLINC06184-IBu 0.90 3.02e-06 1.00e-04
Smp_032120.1 SmLINC06241-IBu 0.96 3.35e-09 1.11e-06
Smp_032120.1 SmLINC06700-IBu 0.93 4.76e-07 3.17e-05
Smp_032120.1 SmLINC06836-IBu 0.97 3.26e-10 2.49e-07
Smp_032120.1 SmLINC06839-IBu 0.93 5.07e-07 3.31e-05
Smp_032120.1 SmLINC06953-IBu 0.94 7.31e-08 8.74e-06
Smp_006830.2 Smp_032120.1 0.92 9.16e-07 5.01e-05
Smp_008910.1 Smp_032120.1 0.94 1.11e-07 1.16e-05
Smp_011270.3 Smp_032120.1 0.95 1.81e-08 3.40e-06
Smp_014660.1 Smp_032120.1 0.96 2.40e-09 8.95e-07
Smp_017650.1 Smp_032120.1 0.93 2.42e-07 1.99e-05
Smp_018590.1 Smp_032120.1 0.95 5.16e-08 6.90e-06
Smp_018800.1 Smp_032120.1 0.97 5.13e-10 3.32e-07
Smp_019260.2 Smp_032120.1 0.93 2.69e-07 2.13e-05
Smp_019940.5 Smp_032120.1 0.94 9.74e-08 1.06e-05
Smp_021340.3 Smp_032120.1 0.91 1.89e-06 8.38e-05
Smp_024820.1 Smp_032120.1 0.94 1.69e-07 1.55e-05
Smp_027990.1 Smp_032120.1 0.98 2.00e-11 4.24e-08
Smp_029940.1 Smp_032120.1 0.96 5.10e-09 1.46e-06
Smp_031770.3 Smp_032120.1 0.97 2.34e-10 2.01e-07
Smp_032320.2 Smp_032120.1 0.92 8.36e-07 4.70e-05
Smp_033670.2 Smp_032120.1 0.95 3.89e-08 5.69e-06
Smp_034840.1 Smp_032120.1 0.96 9.38e-09 2.18e-06
Smp_035200.2 Smp_032120.1 0.90 2.56e-06 1.00e-04
Smp_036270.3 Smp_032120.1 0.95 4.23e-08 6.03e-06
Smp_049600.3 Smp_032120.1 0.97 5.58e-10 3.50e-07
Smp_052290.1 Smp_032120.1 0.98 1.58e-11 3.66e-08
Smp_059340.3 Smp_032120.1 0.94 1.32e-07 1.31e-05
Smp_059530.1 Smp_032120.1 0.92 9.85e-07 5.28e-05
Smp_060190.4 Smp_032120.1 0.94 9.56e-08 1.04e-05
Smp_062070.1 Smp_032120.1 0.96 7.98e-09 1.96e-06
Smp_062610.2 Smp_032120.1 0.91 2.09e-06 8.98e-05
Smp_063650.3 Smp_032120.1 0.93 2.13e-07 1.82e-05
Smp_075290.4 Smp_032120.1 0.96 4.27e-09 1.30e-06
Smp_076040.2 Smp_032120.1 0.96 6.14e-09 1.65e-06
Smp_079260.1 Smp_032120.1 0.96 1.38e-08 2.83e-06
Smp_083380.2 Smp_032120.1 0.93 4.93e-07 3.25e-05
Smp_084940.2 Smp_032120.1 0.96 8.22e-09 2.00e-06
Smp_098370.1 Smp_032120.1 0.94 1.49e-07 1.42e-05
Smp_099160.4 Smp_032120.1 0.90 4.60e-06 1.00e-04
Smp_099560.1 Smp_032120.1 0.93 3.77e-07 2.70e-05
Smp_103540.1 Smp_032120.1 0.96 4.09e-09 1.27e-06
Smp_103930.1 Smp_032120.1 0.95 3.41e-08 5.21e-06
Smp_106750.1 Smp_032120.1 0.91 1.91e-06 8.44e-05
Smp_112520.1 Smp_032120.1 0.94 7.05e-08 8.53e-06
Smp_112930.1 Smp_032120.1 0.92 6.64e-07 4.00e-05
Smp_115510.1 Smp_032120.1 0.93 2.68e-07 2.13e-05
Smp_118960.1 Smp_032120.1 0.91 1.98e-06 8.64e-05
Smp_120740.1 Smp_032120.1 0.95 2.88e-08 4.64e-06
Smp_123870.1 Smp_032120.1 0.96 1.36e-08 2.80e-06
Smp_123920.1 Smp_032120.1 0.90 3.49e-06 1.00e-04
Smp_126560.1 Smp_032120.1 0.91 2.44e-06 1.00e-04
Smp_132470.1 Smp_032120.1 0.94 1.72e-07 1.57e-05
Smp_135010.1 Smp_032120.1 0.94 1.57e-07 1.47e-05
Smp_136120.1 Smp_032120.1 0.97 5.80e-10 3.59e-07
Smp_136720.1 Smp_032120.1 0.94 1.91e-07 1.68e-05
Smp_138140.1 Smp_032120.1 0.93 4.46e-07 3.03e-05
Smp_139170.1 Smp_032120.1 0.96 6.44e-09 1.70e-06
Smp_139940.1 Smp_032120.1 0.98 5.24e-11 7.75e-08
Smp_142980.1 Smp_032120.1 0.90 4.73e-06 1.00e-04
Smp_143180.1 Smp_032120.1 0.96 3.90e-09 1.23e-06
Smp_144120.1 Smp_032120.1 0.95 3.46e-08 5.26e-06
Smp_144350.1 Smp_032120.1 0.96 4.24e-09 1.29e-06
Smp_145950.1 Smp_032120.1 0.96 6.07e-09 1.64e-06
Smp_146920.1 Smp_032120.1 0.91 2.48e-06 1.00e-04
Smp_148110.1 Smp_032120.1 0.98 2.52e-11 4.91e-08
Smp_149220.1 Smp_032120.1 0.90 3.81e-06 1.00e-04
Smp_149870.1 Smp_032120.1 0.97 3.34e-10 2.53e-07
Smp_151220.1 Smp_032120.1 0.91 1.65e-06 7.60e-05
Smp_152540.1 Smp_032120.1 0.92 9.41e-07 5.11e-05
Smp_152900.1 Smp_032120.1 0.93 2.85e-07 2.22e-05
Smp_153210.1 Smp_032120.1 0.97 2.24e-10 1.95e-07
Smp_153650.1 Smp_032120.1 0.97 2.16e-09 8.38e-07
Smp_155250.1 Smp_032120.1 0.93 2.60e-07 2.09e-05
Smp_155690.1 Smp_032120.1 0.95 3.08e-08 4.87e-06
Smp_157270.1 Smp_032120.1 0.93 3.12e-07 2.37e-05
Smp_157280.1 Smp_032120.1 0.96 3.40e-09 1.12e-06
Smp_158680.1 Smp_032120.1 0.92 1.11e-06 5.74e-05
Smp_159070.3 Smp_032120.1 0.97 7.23e-10 4.14e-07
Smp_159070.4 Smp_032120.1 0.96 2.33e-09 8.80e-07
Smp_159150.1 Smp_032120.1 0.93 3.46e-07 2.54e-05
Smp_159380.1 Smp_032120.1 0.95 3.04e-08 4.82e-06
Smp_160670.1 Smp_032120.1 0.95 5.89e-08 7.55e-06
Smp_161270.1 Smp_032120.1 0.90 2.67e-06 1.00e-04
Smp_161280.1 Smp_032120.1 0.90 2.64e-06 1.00e-04
Smp_163550.1 Smp_032120.1 0.92 9.07e-07 4.98e-05
Smp_169500.1 Smp_032120.1 0.94 1.80e-07 1.62e-05
Smp_171420.1 Smp_032120.1 0.91 1.86e-06 8.26e-05
Smp_174170.1 Smp_032120.1 0.97 1.43e-09 6.41e-07
Smp_174750.1 Smp_032120.1 0.96 7.47e-09 1.88e-06
Smp_175290.1 Smp_032120.1 0.95 1.59e-08 3.12e-06
Smp_175300.1 Smp_032120.1 0.96 9.17e-09 2.15e-06
Smp_179740.1 Smp_032120.1 0.92 9.91e-07 5.30e-05
Smp_180050.1 Smp_032120.1 0.94 6.51e-08 8.07e-06
Smp_180630.1 Smp_032120.1 0.97 3.28e-10 2.50e-07
Smp_184370.1 Smp_032120.1 0.97 2.30e-10 1.98e-07
Smp_188230.1 Smp_032120.1 0.94 9.61e-08 1.05e-05
Smp_189180.2 Smp_032120.1 0.92 5.59e-07 3.55e-05
Smp_190370.1 Smp_032120.1 0.96 8.58e-09 2.06e-06
Smp_194110.1 Smp_032120.1 0.90 3.71e-06 1.00e-04
Smp_194140.1 Smp_032120.1 0.92 1.07e-06 5.62e-05
Smp_196410.1 Smp_032120.1 0.97 3.24e-10 2.48e-07
Smp_200120.1 Smp_032120.1 0.92 1.12e-06 5.80e-05
Smp_200810.1 Smp_032120.1 0.91 2.51e-06 1.00e-04
Smp_201670.1 Smp_032120.1 0.92 6.99e-07 4.15e-05
Smp_205050.1 Smp_032120.1 0.91 1.91e-06 8.44e-05
Smp_212600.1 Smp_032120.1 0.94 8.16e-08 9.42e-06