Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


Smp_031770.10 Data


Fig. 6A for with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00171-IBu 0 -0.59 -5.27 3.90 3.47
SmLINC00266-IBu 0 2.25 3.99 6.14 6.95
SmLINC00369-IBu 0 1.32 0.40 6.04 6.28
SmLINC00376-IBu 0 1.87 -0.39 3.34 3.93
SmLINC00525-IBu 0 -1.18 -2.31 1.77 2.53
SmLINC00548-IBu 0 1.58 1.11 7.48 7.20
SmLINC00633-IBu 0 1.89 0.00 7.59 7.46
SmLINC00769-IBu 0 0.00 0.00 11.31 9.29
SmLINC01066-IBu 0 0.76 1.52 6.33 5.39
SmLINC01084-IBu 0 -4.17 -2.32 2.88 3.57
SmLINC01122-IBu 0 0.00 0.00 6.36 6.32
SmLINC01139-IBu 0 -1.59 -5.89 3.96 3.29
SmLINC01171-IBu 0 4.66 1.75 6.39 6.26
SmLINC01231-IBu 0 0.31 -3.75 7.29 6.55
SmLINC01431-IBu 0 4.28 4.33 10.35 10.82
SmLINC01435-IBu 0 -2.57 1.02 6.17 5.55
SmLINC01538-IBu 0 0.00 3.62 10.85 10.43
SmLINC01569-IBu 0 -0.90 -0.28 4.61 4.49
SmLINC01746-IBu 0 -3.80 -0.66 2.43 2.13
SmLINC02084-IBu 0 2.05 2.87 9.42 9.88
SmLINC02545-IBu 0 3.54 1.98 7.53 8.45
SmLINC02546-IBu 0 1.90 1.01 8.94 9.30
SmLINC03108-IBu 0 1.12 -0.64 3.64 3.93
SmLINC03309-IBu 0 -0.28 0.72 5.03 4.47
SmLINC03693-IBu 0 0.04 0.11 4.65 4.21
SmLINC03927-IBu 0 0.00 3.30 7.68 8.27
SmLINC04432-IBu 0 0.66 2.72 5.35 5.03
SmLINC04475-IBu 0 -0.34 2.17 4.09 3.42
SmLINC04684-IBu 0 0.48 -0.86 3.35 3.38
SmLINC05147-IBu 0 -2.38 -0.94 2.89 2.87
SmLINC05258-IBu 0 0.71 -0.55 3.56 3.34
SmLINC06010-IBu 0 1.91 2.45 5.62 4.62
SmLINC06024-IBu 0 -2.97 -2.19 1.09 1.92
SmLINC06221-IBu 0 2.16 3.44 6.39 5.80
SmLINC06415-IBu 0 0.00 5.09 7.86 8.72
SmLINC06418-IBu 0 -2.45 2.43 6.45 5.75
SmLINC06444-IBu 0 -1.92 -0.19 3.94 3.05
SmLINC06536-IBu 0 -3.65 0.03 5.24 4.25
SmLINC06543-IBu 0 -0.52 0.39 3.89 3.37
Smp_031770.10 0 0.00 0.00 10.09 10.31

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_031770.10 SmLINC00171-IBu 0.88 1.26e-05 3.00e-04
Smp_031770.10 SmLINC00266-IBu 0.82 1.00e-04 1.80e-03
Smp_031770.10 SmLINC00369-IBu 0.80 2.00e-04 2.90e-03
Smp_031770.10 SmLINC00376-IBu 0.82 1.00e-04 1.70e-03
Smp_031770.10 SmLINC00525-IBu 0.85 5.76e-05 9.00e-04
Smp_031770.10 SmLINC00548-IBu 0.94 1.54e-07 1.38e-05
Smp_031770.10 SmLINC00633-IBu 0.87 1.84e-05 4.00e-04
Smp_031770.10 SmLINC00769-IBu 0.80 3.00e-04 3.10e-03
Smp_031770.10 SmLINC01066-IBu 0.87 1.80e-05 4.00e-04
Smp_031770.10 SmLINC01084-IBu 0.86 3.57e-05 6.00e-04
Smp_031770.10 SmLINC01122-IBu 0.80 3.00e-04 3.20e-03
Smp_031770.10 SmLINC01139-IBu 0.86 3.03e-05 5.00e-04
Smp_031770.10 SmLINC01171-IBu 0.82 1.00e-04 1.90e-03
Smp_031770.10 SmLINC01231-IBu 0.93 3.99e-07 2.69e-05
Smp_031770.10 SmLINC01431-IBu 0.89 5.93e-06 1.00e-04
Smp_031770.10 SmLINC01435-IBu 0.85 4.16e-05 7.00e-04
Smp_031770.10 SmLINC01538-IBu 0.86 3.35e-05 6.00e-04
Smp_031770.10 SmLINC01569-IBu 0.81 1.00e-04 2.20e-03
Smp_031770.10 SmLINC01746-IBu 0.85 5.04e-05 8.00e-04
Smp_031770.10 SmLINC02084-IBu 0.91 2.38e-06 9.50e-05
Smp_031770.10 SmLINC02545-IBu 0.89 6.34e-06 1.00e-04
Smp_031770.10 SmLINC02546-IBu 0.96 1.16e-08 2.36e-06
Smp_031770.10 SmLINC03108-IBu 0.85 4.25e-05 7.00e-04
Smp_031770.10 SmLINC03309-IBu 0.87 1.51e-05 3.00e-04
Smp_031770.10 SmLINC03693-IBu 0.85 4.80e-05 8.00e-04
Smp_031770.10 SmLINC03927-IBu 0.93 2.92e-07 2.16e-05
Smp_031770.10 SmLINC04432-IBu 0.88 1.19e-05 3.00e-04
Smp_031770.10 SmLINC04475-IBu 0.86 3.87e-05 7.00e-04
Smp_031770.10 SmLINC04684-IBu 0.94 1.42e-07 1.30e-05
Smp_031770.10 SmLINC05147-IBu 0.84 7.03e-05 1.00e-03
Smp_031770.10 SmLINC05258-IBu 0.89 8.69e-06 2.00e-04
Smp_031770.10 SmLINC06010-IBu 0.82 1.00e-04 1.90e-03
Smp_031770.10 SmLINC06024-IBu 0.80 2.00e-04 3.00e-03
Smp_031770.10 SmLINC06221-IBu 0.83 1.00e-04 1.60e-03
Smp_031770.10 SmLINC06415-IBu 0.83 9.90e-05 1.40e-03
Smp_031770.10 SmLINC06418-IBu 0.81 2.00e-04 2.30e-03
Smp_031770.10 SmLINC06444-IBu 0.85 5.19e-05 8.00e-04
Smp_031770.10 SmLINC06536-IBu 0.86 3.71e-05 6.00e-04
Smp_031770.10 SmLINC06543-IBu 0.86 3.85e-05 7.00e-04
Fig. S5 for with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC00548-IBu 0 1.58 1.11 7.48 7.20
SmLINC01155-IBu 0 0.17 0.53 3.76 4.22
SmLINC01231-IBu 0 0.31 -3.75 7.29 6.55
SmLINC01366-IBu 0 -0.99 0.01 4.64 5.16
SmLINC01404-IBu 0 2.90 1.94 5.92 5.78
SmLINC01483-IBu 0 -0.00 1.60 9.89 9.85
SmLINC02084-IBu 0 2.05 2.87 9.42 9.88
SmLINC02247-IBu 0 0.00 1.49 9.41 9.46
SmLINC02546-IBu 0 1.90 1.01 8.94 9.30
SmLINC02547-IBu 0 0.00 0.00 8.13 8.56
SmLINC02706-IBu 0 0.70 0.32 4.53 4.38
SmLINC03690-IBu 0 2.49 -2.52 7.90 7.70
SmLINC03730-IBu 0 0.00 0.00 6.60 6.55
SmLINC03927-IBu 0 0.00 3.30 7.68 8.27
SmLINC04350-IBu 0 0.22 -2.22 5.44 5.01
SmLINC04557-IBu 0 2.23 0.88 6.46 6.23
SmLINC04684-IBu 0 0.48 -0.86 3.35 3.38
SmLINC04725-IBu 0 5.17 4.46 7.70 7.91
SmLINC05251-IBu 0 -4.11 -0.44 2.87 2.65
SmLINC05330-IBu 0 -5.22 0.60 3.99 4.24
SmLINC05422-IBu 0 0.00 2.54 8.92 9.40
SmLINC06237-IBu 0 2.83 1.21 7.74 8.05
SmLINC06986-IBu 0 -1.62 -1.16 2.92 3.16
Smp_000210.1 0 4.25 5.14 7.65 7.33
Smp_013860.1 0 -0.63 -0.67 2.75 3.17
Smp_017080.2 0 -3.00 -3.07 6.06 6.32
Smp_017860.1 0 -0.60 1.51 6.00 5.63
Smp_021790.1 0 -4.11 -4.04 1.46 1.40
Smp_024500.4 0 -4.37 -0.30 3.91 3.91
Smp_029620.1 0 0.00 0.00 6.49 6.20
Smp_031770.10 0 0.00 0.00 10.09 10.31
Smp_042170.1 0 -1.26 -1.32 4.11 4.04
Smp_045680.1 0 0.36 0.29 4.06 4.19
Smp_058660.1 0 1.16 3.97 10.53 10.53
Smp_060420.5 0 -1.67 -0.43 2.87 2.81
Smp_068350.1 0 -1.72 1.44 3.63 3.99
Smp_075230.1 0 0.05 -1.83 5.87 5.45
Smp_076150.2 0 -0.91 0.34 4.10 3.53
Smp_077580.1 0 2.38 2.38 5.95 5.75
Smp_081720.1 0 2.58 3.44 6.45 6.27
Smp_095410.1 0 0.00 0.00 10.39 11.31
Smp_098340.1 0 -0.20 -1.61 3.80 4.67
Smp_114470.1 0 2.17 3.63 5.19 5.28
Smp_122630.1 0 0.00 0.00 9.46 9.85
Smp_124260.1 0 2.79 4.64 5.95 6.24
Smp_125190.1 0 -1.76 0.74 5.43 5.84
Smp_126250.1 0 -2.91 -3.05 3.55 3.61
Smp_128030.1 0 1.83 -1.83 5.23 5.38
Smp_133090.1 0 0.00 2.12 7.48 7.27
Smp_133640.1 0 -1.09 0.40 6.38 6.04
Smp_133950.1 0 -1.23 0.69 4.16 4.37
Smp_137930.1 0 -0.50 0.82 3.67 3.80
Smp_139350.1 0 -1.94 -0.35 3.40 3.23
Smp_139850.1 0 1.00 2.64 5.62 5.34
Smp_140030.1 0 -1.58 -0.98 2.75 2.21
Smp_140380.1 0 3.20 2.93 6.07 6.54
Smp_142420.1 0 1.88 2.68 6.19 6.50
Smp_143550.1 0 -2.27 0.49 4.05 4.02
Smp_144480.1 0 -1.03 -4.71 1.39 2.31
Smp_145320.1 0 0.65 -1.49 3.35 3.95
Smp_145400.1 0 4.59 7.69 11.32 11.39
Smp_147750.1 0 0.23 2.33 4.94 4.25
Smp_149820.1 0 -1.15 -1.28 3.81 4.39
Smp_150350.1 0 -0.00 1.37 5.52 5.76
Smp_151830.1 0 -2.93 -3.91 2.65 1.99
Smp_152090.1 0 1.81 4.08 7.96 7.82
Smp_152390.1 0 2.35 4.26 9.45 9.73
Smp_152470.1 0 -1.56 1.06 4.80 4.40
Smp_155120.1 0 1.08 1.93 4.33 4.16
Smp_156050.1 0 -0.05 3.30 5.87 6.55
Smp_156610.1 0 0.46 -0.08 5.40 5.38
Smp_156820.1 0 0.76 -0.59 5.73 5.95
Smp_156910.1 0 0.90 2.49 6.71 6.48
Smp_157470.1 0 -1.93 -0.56 2.49 2.29
Smp_160010.1 0 -3.09 -4.10 1.42 1.68
Smp_160130.1 0 -0.87 0.97 4.70 4.12
Smp_161060.1 0 -1.83 1.19 5.60 4.88
Smp_161210.1 0 1.38 2.98 6.11 6.03
Smp_167960.1 0 -3.34 0.45 4.54 4.67
Smp_170520.1 0 3.59 3.96 7.18 7.41
Smp_170870.1 0 0.87 2.48 5.34 5.57
Smp_171140.1 0 0.98 2.20 4.53 4.32
Smp_174430.1 0 0.50 1.10 5.08 5.18
Smp_174490.1 0 1.42 2.17 6.16 6.24
Smp_175980.1 0 -0.62 0.62 3.76 4.07
Smp_179570.1 0 0.78 4.44 7.79 7.23
Smp_188320.1 0 -0.86 -2.82 2.84 2.89
Smp_197700.1 0 -1.61 0.76 4.30 4.54
Smp_199250.1 0 1.51 2.36 4.75 5.05
Smp_199350.1 0 -0.99 0.23 3.44 4.07
Smp_199800.1 0 0.96 1.23 4.82 5.13
Smp_200650.1 0 2.69 4.00 5.86 6.42
Smp_201170.1 0 -0.33 0.67 3.61 3.68

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_031770.10 SmLINC00548-IBu 0.94 1.54e-07 1.46e-05
Smp_031770.10 SmLINC01155-IBu 0.91 1.79e-06 8.04e-05
Smp_031770.10 SmLINC01231-IBu 0.93 3.99e-07 2.81e-05
Smp_031770.10 SmLINC01366-IBu 0.92 5.85e-07 3.66e-05
Smp_031770.10 SmLINC01404-IBu 0.93 3.06e-07 2.34e-05
Smp_031770.10 SmLINC01483-IBu 0.92 5.53e-07 3.52e-05
Smp_031770.10 SmLINC02084-IBu 0.91 2.38e-06 9.83e-05
Smp_031770.10 SmLINC02247-IBu 0.91 1.28e-06 6.38e-05
Smp_031770.10 SmLINC02546-IBu 0.96 1.16e-08 2.52e-06
Smp_031770.10 SmLINC02547-IBu 0.92 1.03e-06 5.48e-05
Smp_031770.10 SmLINC02706-IBu 0.90 2.63e-06 1.00e-04
Smp_031770.10 SmLINC03690-IBu 0.93 4.37e-07 2.99e-05
Smp_031770.10 SmLINC03730-IBu 0.93 2.04e-07 1.76e-05
Smp_031770.10 SmLINC03927-IBu 0.93 2.92e-07 2.26e-05
Smp_031770.10 SmLINC04350-IBu 0.91 1.97e-06 8.63e-05
Smp_031770.10 SmLINC04557-IBu 0.91 1.93e-06 8.48e-05
Smp_031770.10 SmLINC04684-IBu 0.94 1.42e-07 1.37e-05
Smp_031770.10 SmLINC04725-IBu 0.90 2.84e-06 1.00e-04
Smp_031770.10 SmLINC05251-IBu 0.91 1.61e-06 7.46e-05
Smp_031770.10 SmLINC05330-IBu 0.91 2.10e-06 9.01e-05
Smp_031770.10 SmLINC05422-IBu 0.96 4.01e-09 1.25e-06
Smp_031770.10 SmLINC06237-IBu 0.92 9.23e-07 5.04e-05
Smp_031770.10 SmLINC06986-IBu 0.92 1.11e-06 5.77e-05
Smp_000210.1 Smp_031770.10 0.90 3.61e-06 1.00e-04
Smp_013860.1 Smp_031770.10 0.92 8.80e-07 4.87e-05
Smp_017080.2 Smp_031770.10 0.90 2.74e-06 1.00e-04
Smp_017860.1 Smp_031770.10 0.90 4.25e-06 1.00e-04
Smp_021790.1 Smp_031770.10 0.92 9.09e-07 4.99e-05
Smp_031770.10 Smp_024500.4 0.90 3.64e-06 1.00e-04
Smp_031770.10 Smp_029620.1 0.91 2.12e-06 9.07e-05
Smp_031770.10 Smp_042170.1 0.94 8.37e-08 9.58e-06
Smp_031770.10 Smp_045680.1 0.90 3.71e-06 1.00e-04
Smp_058660.1 Smp_031770.10 0.90 4.36e-06 1.00e-04
Smp_060420.5 Smp_031770.10 0.90 3.25e-06 1.00e-04
Smp_068350.1 Smp_031770.10 0.94 1.09e-07 1.15e-05
Smp_031770.10 Smp_075230.1 0.91 2.37e-06 9.80e-05
Smp_031770.10 Smp_076150.2 0.91 1.93e-06 8.49e-05
Smp_031770.10 Smp_077580.1 0.90 2.63e-06 1.00e-04
Smp_031770.10 Smp_081720.1 0.91 1.38e-06 6.70e-05
Smp_095410.1 Smp_031770.10 0.93 4.81e-07 3.20e-05
Smp_098340.1 Smp_031770.10 0.90 3.91e-06 1.00e-04
Smp_031770.10 Smp_114470.1 0.90 4.23e-06 1.00e-04
Smp_031770.10 Smp_122630.1 0.90 3.19e-06 1.00e-04
Smp_031770.10 Smp_124260.1 0.91 2.30e-06 9.61e-05
Smp_031770.10 Smp_125190.1 0.91 2.44e-06 1.00e-04
Smp_031770.10 Smp_126250.1 0.90 3.47e-06 1.00e-04
Smp_128030.1 Smp_031770.10 0.90 2.80e-06 1.00e-04
Smp_031770.10 Smp_133090.1 0.92 7.27e-07 4.26e-05
Smp_031770.10 Smp_133640.1 0.90 3.57e-06 1.00e-04
Smp_031770.10 Smp_133950.1 0.91 2.17e-06 9.23e-05
Smp_137930.1 Smp_031770.10 0.94 1.82e-07 1.63e-05
Smp_031770.10 Smp_139350.1 0.95 4.62e-08 6.40e-06
Smp_139850.1 Smp_031770.10 0.91 1.64e-06 7.58e-05
Smp_031770.10 Smp_140030.1 0.90 3.17e-06 1.00e-04
Smp_031770.10 Smp_140380.1 0.97 8.13e-10 4.46e-07
Smp_142420.1 Smp_031770.10 0.91 2.51e-06 1.00e-04
Smp_031770.10 Smp_143550.1 0.92 8.31e-07 4.68e-05
Smp_031770.10 Smp_144480.1 0.90 2.59e-06 1.00e-04
Smp_031770.10 Smp_145320.1 0.95 3.03e-08 4.81e-06
Smp_031770.10 Smp_145400.1 0.91 1.49e-06 7.08e-05
Smp_147750.1 Smp_031770.10 0.90 4.64e-06 1.00e-04
Smp_149820.1 Smp_031770.10 0.90 2.72e-06 1.00e-04
Smp_031770.10 Smp_150350.1 0.90 3.58e-06 1.00e-04
Smp_031770.10 Smp_151830.1 0.90 3.52e-06 1.00e-04
Smp_031770.10 Smp_152090.1 0.90 3.24e-06 1.00e-04
Smp_031770.10 Smp_152390.1 0.93 3.52e-07 2.57e-05
Smp_031770.10 Smp_152470.1 0.90 3.43e-06 1.00e-04
Smp_155120.1 Smp_031770.10 0.92 7.04e-07 4.17e-05
Smp_031770.10 Smp_156050.1 0.90 4.50e-06 1.00e-04
Smp_031770.10 Smp_156610.1 0.90 4.47e-06 1.00e-04
Smp_031770.10 Smp_156820.1 0.93 3.94e-07 2.78e-05
Smp_156910.1 Smp_031770.10 0.90 3.36e-06 1.00e-04
Smp_157470.1 Smp_031770.10 0.93 2.02e-07 1.75e-05
Smp_160010.1 Smp_031770.10 0.92 1.18e-06 6.00e-05
Smp_031770.10 Smp_160130.1 0.90 2.82e-06 1.00e-04
Smp_031770.10 Smp_161060.1 0.90 4.24e-06 1.00e-04
Smp_031770.10 Smp_161210.1 0.94 1.85e-07 1.65e-05
Smp_167960.1 Smp_031770.10 0.91 2.33e-06 9.70e-05
Smp_031770.10 Smp_170520.1 0.91 2.48e-06 1.00e-04
Smp_170870.1 Smp_031770.10 0.90 3.41e-06 1.00e-04
Smp_171140.1 Smp_031770.10 0.90 2.84e-06 1.00e-04
Smp_031770.10 Smp_174430.1 0.90 4.43e-06 1.00e-04
Smp_031770.10 Smp_174490.1 0.91 1.39e-06 6.75e-05
Smp_031770.10 Smp_175980.1 0.92 5.68e-07 3.59e-05
Smp_031770.10 Smp_179570.1 0.92 1.03e-06 5.45e-05
Smp_031770.10 Smp_188320.1 0.92 1.00e-06 5.33e-05
Smp_031770.10 Smp_197700.1 0.90 3.25e-06 1.00e-04
Smp_031770.10 Smp_199250.1 0.90 3.02e-06 1.00e-04
Smp_031770.10 Smp_199350.1 0.90 4.47e-06 1.00e-04
Smp_199800.1 Smp_031770.10 0.95 3.55e-08 5.36e-06
Smp_200650.1 Smp_031770.10 0.91 2.40e-06 9.90e-05
Smp_031770.10 Smp_201170.1 0.93 2.95e-07 2.28e-05