Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC06960-IBu Data

Chromosome: SC 0570 - Coordinate: SC 0570:7460-10507 - Strand: +

Fig. S5 for SmLINC06960-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_021920.1 0 0.33 1.47 -5.43 -11.17
SmLINC06960-IBu 0 -0.54 0.75 -5.12 -8.06
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_021920.1 SmLINC06960-IBu 0.93 2.00e-07 1.74e-05
Smp_159070.3 SmLINC06960-IBu 0.91 1.89e-06 8.35e-05