Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06892-IBu Data

Chromosome: SC 0331 - Coordinate: SC 0331:39951-44087 - Strand: -


Fig. 6A for SmLINC06892-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_183020.6 0 -2.31 -1.58 -15.79 -15.79
Smp_183020.1 0 -2.31 -1.58 -15.79 -15.79
Smp_184460.1 0 -2.24 -5.26 -13.63 -13.63
Smp_055220.2 0 -2.15 -2.21 -13.10 -13.10
Smp_185360.1 0 -2.43 -5.85 -12.83 -12.83
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_150690.2 0 -2.07 -12.58 -12.58 -12.58
SmLINC06892-IBu 0 -2.10 -3.44 -12.52 -12.52
Smp_188900.1 0 -1.35 -4.02 -11.76 -11.76
Smp_009650.2 0 -7.49 -7.79 -8.95 -11.71
Smp_206150.1 0 -1.95 -4.12 -11.47 -11.47
Smp_133770.1 0 -4.18 -7.68 -11.38 -11.45
Smp_153240.1 0 -4.59 -8.67 -11.23 -11.04
Smp_178240.1 0 -3.79 -9.33 -8.87 -11.00
Smp_202140.1 0 -1.27 -3.64 -10.44 -10.44
Smp_145810.2 0 -1.83 -3.47 -4.75 -10.08
Smp_110400.3 0 -1.47 -2.30 -8.95 -9.88
Smp_085290.3 0 -2.11 -9.33 -13.07 -9.78
Smp_168380.1 0 -1.89 -2.82 -9.66 -9.66
Smp_182880.1 0 -2.14 -2.31 -8.86 -9.55
Smp_190190.1 0 -1.71 -0.81 -9.39 -9.39
Smp_004230.1 0 -1.29 -9.36 -9.36 -9.36
Smp_114740.1 0 -1.29 -9.36 -9.36 -9.36
Smp_100790.1 0 -1.29 -9.36 -9.36 -9.36
Smp_190320.1 0 -2.26 -2.78 -8.01 -9.33
Smp_149190.1 0 -3.08 -5.94 -9.47 -9.18
Smp_108050.1 0 -2.06 -3.07 -8.81 -9.10
Smp_005860.3 0 -2.06 -4.24 -7.23 -8.92
Smp_046090.1 0 -4.19 -6.28 -7.15 -8.65
Smp_190590.1 0 -2.59 -2.98 -7.31 -8.64
Smp_182770.1 0 -1.46 -4.03 -8.25 -8.62
Smp_202540.1 0 -2.41 -1.38 -6.47 -8.50
Smp_195110.1 0 -0.78 -1.68 -8.24 -8.43
Smp_074570.1 0 -1.85 -4.23 -8.15 -8.27
Smp_194000.1 0 -1.48 -1.97 -6.64 -8.23
Smp_032990.1 0 -1.53 -9.49 -13.75 -8.21
Smp_140680.2 0 -1.06 -11.75 -8.40 -8.18
Smp_037020.1 0 -2.12 -8.24 -8.43 -8.13
Smp_145710.1 0 -1.79 -2.79 -7.90 -7.78
Smp_005860.1 0 -1.88 -5.14 -8.12 -7.71
Smp_200280.1 0 -1.49 -0.63 -7.84 -7.50
Smp_113760.1 0 -1.77 -5.35 -7.90 -7.26
Smp_036400.2 0 -2.63 -11.95 -8.03 -7.25
Smp_038560.6 0 -3.08 -4.79 -5.99 -7.18
Smp_105610.1 0 -3.66 -7.36 -5.82 -7.17
Smp_084400.4 0 -2.64 -4.06 -5.30 -7.16
Smp_186610.1 0 -3.09 -6.92 -6.26 -7.07
Smp_205080.1 0 -1.33 -0.97 -6.34 -7.04
Smp_165180.1 0 -1.47 -9.43 -12.79 -7.00
Smp_194040.1 0 -2.17 -6.63 -5.72 -6.95
Smp_202700.1 0 -2.94 -2.50 -4.90 -6.94
Smp_190940.1 0 -3.61 -6.81 -3.30 -6.81
Smp_028990.2 0 -2.03 -4.85 -4.73 -6.76
Smp_192880.1 0 -2.57 -3.41 -5.24 -6.71
Smp_185180.1 0 -1.60 -2.75 -5.44 -6.67
Smp_190390.1 0 -1.86 -3.88 -4.81 -6.59
Smp_042270.1 0 -6.69 -4.66 -8.17 -6.53
Smp_205900.1 0 -3.56 -6.12 -5.80 -6.36
Smp_167350.1 0 -0.80 -1.92 -3.39 -6.34
Smp_106390.1 0 -2.35 -4.90 -10.78 -6.23
Smp_157310.1 0 -3.02 -6.78 -4.07 -5.91
Smp_205800.1 0 -0.55 -2.89 -6.44 -5.86
Smp_199840.1 0 -1.81 -3.67 -4.48 -5.82
Smp_206130.1 0 -1.65 -4.00 -5.51 -5.79
Smp_060420.3 0 -1.56 -2.67 -4.56 -5.71
Smp_154020.1 0 -1.89 -2.51 -3.88 -5.45
Smp_065580.1 0 -2.41 -12.61 -6.08 -5.45
Smp_006560.1 0 -3.55 -6.46 -6.31 -5.44
Smp_204400.1 0 -0.76 -1.09 -4.78 -5.38
Smp_188600.1 0 -1.05 -3.54 -4.81 -5.04
Smp_061940.1 0 -2.48 -6.54 -5.15 -5.02
Smp_066010.1 0 -2.34 -10.90 -6.48 -4.88
Smp_042160.1 0 -2.29 -5.11 -4.28 -4.75
Smp_133310.1 0 -1.74 -4.20 -4.35 -4.73
Smp_148800.1 0 -3.26 -5.77 -5.61 -4.70
Smp_033610.1 0 -2.04 -4.32 -5.07 -4.63
Smp_022430.1 0 -3.19 -4.81 -4.61 -4.50
Smp_067980.1 0 -0.94 -11.67 -4.00 -4.18
Smp_154300.1 0 -4.18 -5.59 -3.13 -4.15
Smp_002640.1 0 -3.78 -3.97 -2.17 -4.00
Smp_179460.1 0 -2.52 -7.07 -4.09 -3.97
Smp_205190.1 0 -5.03 -3.88 -4.78 -3.78
Smp_009390.1 0 -2.49 -4.72 -3.30 -3.76
Smp_201900.1 0 -0.73 -2.99 -4.99 -3.71
Smp_097750.1 0 -1.63 -3.99 -4.48 -3.56
Smp_059930.1 0 -3.75 -7.72 -3.31 -3.23
Smp_113710.1 0 -3.35 -5.78 -3.90 -2.82
Smp_029930.1 0 -2.45 -5.79 -4.41 -2.49
Smp_061580.1 0 -1.55 -4.87 -3.14 -2.48
Smp_007900.2 0 -2.04 -7.23 -2.98 -2.21
Smp_053700.1 0 -3.20 -7.73 -2.51 -1.90

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_002640.1 SmLINC06892-IBu 0.80 3.00e-04 3.40e-03
Smp_004230.1 SmLINC06892-IBu 0.85 5.38e-05 9.00e-04
Smp_005860.1 SmLINC06892-IBu 0.86 2.69e-05 5.00e-04
Smp_005860.3 SmLINC06892-IBu 0.94 7.13e-08 8.14e-06
Smp_006560.1 SmLINC06892-IBu 0.82 1.00e-04 2.00e-03
Smp_007900.2 SmLINC06892-IBu 0.91 2.32e-06 9.33e-05
Smp_009390.1 SmLINC06892-IBu 0.93 4.08e-07 2.72e-05
Smp_009650.2 SmLINC06892-IBu 0.93 3.32e-07 2.36e-05
Smp_022430.1 SmLINC06892-IBu 0.83 1.00e-04 1.40e-03
Smp_028990.2 SmLINC06892-IBu 0.80 2.00e-04 3.00e-03
Smp_029930.1 SmLINC06892-IBu 0.85 5.27e-05 8.00e-04
Smp_032990.1 SmLINC06892-IBu 0.87 1.56e-05 3.00e-04
Smp_033610.1 SmLINC06892-IBu 0.86 3.05e-05 5.00e-04
Smp_036400.2 SmLINC06892-IBu 0.96 1.04e-08 2.19e-06
Smp_037020.1 SmLINC06892-IBu 0.88 1.20e-05 3.00e-04
Smp_038560.6 SmLINC06892-IBu 0.94 1.20e-07 1.16e-05
Smp_042160.1 SmLINC06892-IBu 0.86 2.97e-05 5.00e-04
Smp_042270.1 SmLINC06892-IBu 0.93 1.99e-07 1.65e-05
Smp_046090.1 SmLINC06892-IBu 0.94 1.43e-07 1.31e-05
Smp_053700.1 SmLINC06892-IBu 0.81 2.00e-04 2.50e-03
Smp_055220.2 SmLINC06892-IBu 0.84 7.04e-05 1.00e-03
Smp_059930.1 SmLINC06892-IBu 0.90 4.80e-06 1.00e-04
Smp_060420.3 SmLINC06892-IBu 0.83 1.00e-04 1.40e-03
Smp_061580.1 SmLINC06892-IBu 0.87 1.62e-05 3.00e-04
Smp_061940.1 SmLINC06892-IBu 0.91 1.61e-06 7.20e-05
Smp_065580.1 SmLINC06892-IBu 0.83 1.00e-04 1.50e-03
Smp_066010.1 SmLINC06892-IBu 0.97 2.00e-09 7.39e-07
Smp_067980.1 SmLINC06892-IBu 0.86 3.73e-05 6.00e-04
Smp_074570.1 SmLINC06892-IBu 0.87 1.64e-05 3.00e-04
Smp_084400.4 SmLINC06892-IBu 0.88 9.01e-06 2.00e-04
Smp_085290.3 SmLINC06892-IBu 0.92 7.56e-07 4.20e-05
Smp_097750.1 SmLINC06892-IBu 0.85 5.24e-05 8.00e-04
Smp_100790.1 SmLINC06892-IBu 0.85 5.38e-05 9.00e-04
Smp_102670.1 SmLINC06892-IBu 0.80 2.00e-04 3.00e-03
Smp_105610.1 SmLINC06892-IBu 0.91 2.00e-06 8.42e-05
Smp_106390.1 SmLINC06892-IBu 0.88 1.02e-05 2.00e-04
Smp_108050.1 SmLINC06892-IBu 0.85 4.37e-05 7.00e-04
Smp_110400.3 SmLINC06892-IBu 0.84 6.76e-05 1.00e-03
Smp_113710.1 SmLINC06892-IBu 0.90 2.53e-06 9.95e-05
Smp_113760.1 SmLINC06892-IBu 0.95 1.69e-08 3.04e-06
Smp_114740.1 SmLINC06892-IBu 0.85 5.38e-05 9.00e-04
Smp_133310.1 SmLINC06892-IBu 0.82 1.00e-04 2.00e-03
Smp_133770.1 SmLINC06892-IBu 0.84 6.98e-05 1.00e-03
Smp_140680.2 SmLINC06892-IBu 0.89 5.64e-06 1.00e-04
Smp_145710.1 SmLINC06892-IBu 0.83 9.62e-05 1.30e-03
Smp_145810.2 SmLINC06892-IBu 0.87 1.62e-05 3.00e-04
Smp_148800.1 SmLINC06892-IBu 0.94 1.50e-07 1.36e-05
Smp_149190.1 SmLINC06892-IBu 0.97 7.68e-10 3.98e-07
Smp_150690.2 SmLINC06892-IBu 0.94 9.36e-08 9.80e-06
Smp_153240.1 SmLINC06892-IBu 0.84 8.85e-05 1.20e-03
Smp_154020.1 SmLINC06892-IBu 0.83 1.00e-04 1.60e-03
Smp_154300.1 SmLINC06892-IBu 0.82 1.00e-04 1.70e-03
Smp_157310.1 SmLINC06892-IBu 0.80 2.00e-04 2.70e-03
Smp_165180.1 SmLINC06892-IBu 0.86 3.57e-05 6.00e-04
Smp_167350.1 SmLINC06892-IBu 0.81 1.00e-04 2.20e-03
Smp_168380.1 SmLINC06892-IBu 0.82 1.00e-04 2.10e-03
Smp_178240.1 SmLINC06892-IBu 0.88 9.07e-06 2.00e-04
Smp_179460.1 SmLINC06892-IBu 0.81 2.00e-04 2.40e-03
Smp_182770.1 SmLINC06892-IBu 0.85 5.09e-05 8.00e-04
Smp_182880.1 SmLINC06892-IBu 0.83 9.54e-05 1.30e-03
Smp_183020.1 SmLINC06892-IBu 0.80 2.00e-04 2.90e-03
Smp_183020.6 SmLINC06892-IBu 0.80 2.00e-04 2.90e-03
Smp_184460.1 SmLINC06892-IBu 0.95 2.52e-08 3.99e-06
Smp_185180.1 SmLINC06892-IBu 0.85 4.81e-05 8.00e-04
Smp_185360.1 SmLINC06892-IBu 0.92 6.75e-07 3.88e-05
Smp_186610.1 SmLINC06892-IBu 0.93 5.14e-07 3.21e-05
Smp_188600.1 SmLINC06892-IBu 0.90 4.75e-06 1.00e-04
Smp_188900.1 SmLINC06892-IBu 0.84 6.04e-05 9.00e-04
Smp_190190.1 SmLINC06892-IBu 0.84 6.20e-05 9.00e-04
Smp_190320.1 SmLINC06892-IBu 0.95 5.73e-08 7.00e-06
Smp_190390.1 SmLINC06892-IBu 0.92 5.88e-07 3.52e-05
Smp_190590.1 SmLINC06892-IBu 0.97 2.64e-10 1.99e-07
Smp_190940.1 SmLINC06892-IBu 0.84 6.15e-05 9.00e-04
Smp_192880.1 SmLINC06892-IBu 0.97 1.03e-09 4.82e-07
Smp_194000.1 SmLINC06892-IBu 0.83 1.00e-04 1.60e-03
Smp_194040.1 SmLINC06892-IBu 0.90 4.85e-06 1.00e-04
Smp_195110.1 SmLINC06892-IBu 0.80 2.00e-04 3.10e-03
Smp_199840.1 SmLINC06892-IBu 0.90 3.19e-06 1.00e-04
Smp_200280.1 SmLINC06892-IBu 0.80 3.00e-04 3.30e-03
Smp_201900.1 SmLINC06892-IBu 0.84 8.53e-05 1.20e-03
Smp_202140.1 SmLINC06892-IBu 0.88 1.06e-05 2.00e-04
Smp_202540.1 SmLINC06892-IBu 0.84 8.26e-05 1.20e-03
Smp_202700.1 SmLINC06892-IBu 0.93 2.44e-07 1.90e-05
Smp_204400.1 SmLINC06892-IBu 0.85 4.10e-05 7.00e-04
Smp_205080.1 SmLINC06892-IBu 0.89 5.05e-06 1.00e-04
Smp_205190.1 SmLINC06892-IBu 0.86 2.76e-05 5.00e-04
Smp_205800.1 SmLINC06892-IBu 0.83 1.00e-04 1.40e-03
Smp_205900.1 SmLINC06892-IBu 0.82 1.00e-04 1.90e-03
Smp_206130.1 SmLINC06892-IBu 0.80 3.00e-04 3.30e-03
Smp_206150.1 SmLINC06892-IBu 0.89 7.29e-06 2.00e-04
Fig. S5 for SmLINC06892-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_184460.1 0 -2.24 -5.26 -13.63 -13.63
Smp_185360.1 0 -2.43 -5.85 -12.83 -12.83
Smp_150690.2 0 -2.07 -12.58 -12.58 -12.58
SmLINC06892-IBu 0 -2.10 -3.44 -12.52 -12.52
Smp_009650.2 0 -7.49 -7.79 -8.95 -11.71
Smp_085290.3 0 -2.11 -9.33 -13.07 -9.78
Smp_036400.2 0 -2.63 -11.95 -8.03 -7.25
Smp_066010.1 0 -2.34 -10.90 -6.48 -4.88

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_009650.2 SmLINC06892-IBu 0.93 3.32e-07 2.47e-05
Smp_036400.2 SmLINC06892-IBu 0.96 1.04e-08 2.34e-06
Smp_066010.1 SmLINC06892-IBu 0.97 2.00e-09 7.96e-07
Smp_085290.3 SmLINC06892-IBu 0.92 7.56e-07 4.38e-05
Smp_150690.2 SmLINC06892-IBu 0.94 9.36e-08 1.03e-05
Smp_184460.1 SmLINC06892-IBu 0.95 2.52e-08 4.24e-06
Smp_185360.1 SmLINC06892-IBu 0.92 6.75e-07 4.05e-05