Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC06714-IBu Data

Chromosome: SC 0221 - Coordinate: SC 0221:268798-270320 - Strand: +

Fig. S5 for SmLINC06714-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_205860.1 0 -1.49 -2.52 -10.82 -15.29
Smp_009320.1 0 -0.45 -10.12 -7.98 -10.12
SmLINC06714-IBu 0 -0.14 -3.28 -3.40 -3.90

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_009320.1 SmLINC06714-IBu 0.91 1.75e-06 7.93e-05
Smp_205860.1 SmLINC06714-IBu 0.92 6.25e-07 3.84e-05