Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06577-IBu Data

Chromosome: SC 0194 - Coordinate: SC 0194:19166-20538 - Strand: -


Fig. S5 for SmLINC06577-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_205330.1 0 0.40 -0.14 -11.58 -8.81
SmLINC06577-IBu 0 -0.27 -1.16 -4.93 -5.29
Smp_038870.2 0 -10.39 -10.39 1.75 2.41

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_038870.2 SmLINC06577-IBu -0.9 3.75e-06 1.00e-04
Smp_205330.1 SmLINC06577-IBu 0.9 4.58e-06 1.00e-04