Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06495-IBu Data

Chromosome: SC 0179 - Coordinate: SC 0179:158025-158797 - Strand: -


Fig. S5 for SmLINC06495-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_194380.1 0 2.98 2.11 7.89 10.14
Smp_163700.1 0 -1.15 0.72 8.02 10.29
Smp_203030.1 0 2.55 0.41 8.36 10.39
Smp_159650.1 0 4.04 4.18 8.26 10.40
Smp_105450.2 0 0.07 -1.43 6.91 10.46
Smp_138360.1 0 -0.10 -4.27 4.84 10.60
Smp_137810.1 0 6.00 3.74 9.29 10.87
Smp_196830.1 0 -0.76 0.59 8.97 10.89
Smp_139160.1 0 1.79 5.17 7.78 10.90
Smp_181070.1 0 0.13 0.63 8.07 11.05
Smp_016490.2 0 1.32 2.33 8.95 11.08
Smp_028870.1 0 1.64 3.08 9.06 11.09
Smp_194910.1 0 0.37 1.92 8.43 11.13
Smp_041540.1 0 3.75 -1.68 7.22 11.17
Smp_037720.1 0 2.04 2.35 9.15 11.20
Smp_162320.1 0 0.58 2.27 8.70 11.23
Smp_155570.1 0 -0.46 1.69 9.73 11.27
Smp_070540.1 0 2.28 0.82 8.01 11.54
Smp_202610.1 0 0.45 2.30 9.93 11.71
Smp_102780.1 0 3.53 4.72 9.81 11.88
Smp_137720.1 0 0.96 3.51 9.34 11.95
Smp_136730.1 0 1.59 3.88 8.90 11.96
Smp_123880.1 0 1.71 4.05 9.88 12.08
Smp_164320.1 0 0.97 4.76 9.93 12.08
Smp_126340.1 0 0.00 2.97 7.05 12.21
Smp_086450.3 0 0.00 0.00 9.98 12.32
Smp_205580.1 0 2.85 4.80 9.78 12.43
SmLINC06495-IBu 0 3.07 4.36 10.08 12.58
Smp_187140.1 0 1.31 4.33 10.17 12.62
Smp_140720.1 0 4.90 5.49 10.97 12.76
Smp_085180.1 0 1.48 5.09 10.70 12.92
Smp_139240.1 0 1.42 4.34 10.58 13.09
Smp_137700.1 0 2.72 4.76 8.79 13.14
Smp_131490.1 0 4.93 6.36 11.30 13.29
Smp_083430.1 0 4.18 6.49 11.73 13.40
Smp_130100.1 0 -1.34 3.61 11.71 14.01
Smp_131410.1 0 3.39 4.65 11.85 14.02
Smp_004420.3 0 0.00 5.84 10.64 14.52
Smp_007950.1 0 5.54 7.26 12.66 14.89
Smp_105450.1 0 4.55 9.19 10.26 14.94

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_004420.3 SmLINC06495-IBu 0.95 2.21e-08 3.89e-06
Smp_007950.1 SmLINC06495-IBu 0.99 1.32e-12 7.84e-09
Smp_016490.2 SmLINC06495-IBu 0.97 7.61e-10 4.28e-07
Smp_028870.1 SmLINC06495-IBu 0.97 4.01e-10 2.84e-07
Smp_037720.1 SmLINC06495-IBu 0.96 1.11e-08 2.45e-06
Smp_041540.1 SmLINC06495-IBu 0.91 1.27e-06 6.35e-05
Smp_070540.1 SmLINC06495-IBu 0.94 1.13e-07 1.17e-05
Smp_083430.1 SmLINC06495-IBu 0.96 3.04e-09 1.04e-06
Smp_085180.1 SmLINC06495-IBu 0.98 1.12e-11 2.95e-08
Smp_086450.3 SmLINC06495-IBu 0.92 9.95e-07 5.31e-05
Smp_102780.1 SmLINC06495-IBu 0.98 1.52e-10 1.52e-07
Smp_105450.1 SmLINC06495-IBu 0.95 4.09e-08 5.90e-06
Smp_105450.2 SmLINC06495-IBu 0.96 3.51e-09 1.14e-06
Smp_123880.1 SmLINC06495-IBu 0.99 8.39e-14 1.47e-09
Smp_126340.1 SmLINC06495-IBu 0.94 1.36e-07 1.33e-05
Smp_130100.1 SmLINC06495-IBu 0.96 9.79e-09 2.25e-06
Smp_131410.1 SmLINC06495-IBu 0.99 3.69e-13 3.57e-09
Smp_131490.1 SmLINC06495-IBu 0.96 3.22e-09 1.08e-06
Smp_136730.1 SmLINC06495-IBu 0.98 2.91e-11 5.38e-08
Smp_137700.1 SmLINC06495-IBu 0.95 3.22e-08 5.02e-06
Smp_137720.1 SmLINC06495-IBu 0.99 1.70e-12 9.20e-09
Smp_137810.1 SmLINC06495-IBu 0.94 1.64e-07 1.52e-05
Smp_138360.1 SmLINC06495-IBu 0.91 2.23e-06 9.39e-05
Smp_139160.1 SmLINC06495-IBu 0.97 9.89e-10 5.06e-07
Smp_139240.1 SmLINC06495-IBu 0.99 9.59e-15 3.89e-10
Smp_140720.1 SmLINC06495-IBu 0.93 2.31e-07 1.92e-05
Smp_155570.1 SmLINC06495-IBu 0.94 9.85e-08 1.07e-05
Smp_159650.1 SmLINC06495-IBu 0.95 1.84e-08 3.43e-06
Smp_162320.1 SmLINC06495-IBu 0.98 7.41e-12 2.28e-08
Smp_163700.1 SmLINC06495-IBu 0.99 1.00e-13 1.63e-09
Smp_164320.1 SmLINC06495-IBu 0.98 1.61e-11 3.70e-08
Smp_181070.1 SmLINC06495-IBu 0.97 7.69e-10 4.31e-07
Smp_187140.1 SmLINC06495-IBu 0.99 1.51e-13 2.08e-09
Smp_194380.1 SmLINC06495-IBu 0.99 5.80e-15 2.82e-10
Smp_194910.1 SmLINC06495-IBu 0.98 3.80e-12 1.51e-08
Smp_196830.1 SmLINC06495-IBu 0.97 1.67e-09 7.08e-07
Smp_202610.1 SmLINC06495-IBu 0.96 3.70e-09 1.18e-06
Smp_203030.1 SmLINC06495-IBu 0.95 3.46e-08 5.26e-06
Smp_205580.1 SmLINC06495-IBu 0.99 7.85e-15 3.46e-10