Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06494-IBu Data

Chromosome: SC 0179 - Coordinate: SC 0179:0-524 - Strand: +


Fig. S5 for SmLINC06494-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_194060.1 0 0.19 1.68 -10.58 -10.66
Smp_098890.1 0 -0.06 -0.10 -10.16 -9.46
SmLINC06494-IBu 0 -1.07 -1.19 -6.36 -6.05

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_098890.1 SmLINC06494-IBu 0.94 1.79e-07 1.61e-05
Smp_194060.1 SmLINC06494-IBu 0.94 1.18e-07 1.21e-05