Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06491-IBu Data

Chromosome: SC 0179 - Coordinate: SC 0179:0-5001 - Strand: +


Fig. S5 for SmLINC06491-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_061940.2 0 -3.16 -5.22 -11.34 -15.89
Smp_016200.1 0 -3.14 -11.01 -6.75 -11.01
SmLINC06491-IBu 0 -2.11 -3.83 -3.48 -3.52

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_016200.1 SmLINC06491-IBu 0.93 2.06e-07 1.77e-05
Smp_061940.2 SmLINC06491-IBu 0.94 1.20e-07 1.22e-05