Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06210-IBu Data

Chromosome: SC 0137 - Coordinate: SC 0137:439237-442091 - Strand: +


Fig. 6A for SmLINC06210-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_035200.3 0 -0.02 -1.98 -15.09 -15.09
Smp_185170.1 0 0.77 -2.29 -11.66 -11.66
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_111640.1 0 0.66 -0.66 -11.28 -11.28
Smp_205450.1 0 0.54 -1.87 -11.14 -11.14
Smp_032320.1 0 1.14 -10.97 -10.97 -10.97
Smp_125070.1 0 0.25 -4.98 -10.91 -10.91
Smp_185680.1 0 1.75 -5.39 -10.59 -10.59
Smp_112090.1 0 0.15 -7.44 -10.10 -10.10
Smp_204360.1 0 0.81 -0.39 -6.29 -10.08
Smp_150070.1 0 0.81 -2.65 -7.50 -9.92
Smp_205930.1 0 0.31 -2.62 -7.34 -9.86
Smp_111340.6 0 0.97 -0.72 -7.78 -9.70
Smp_202490.1 0 0.07 -2.34 -9.58 -9.58
Smp_205480.1 0 0.40 -2.39 -9.52 -9.52
Smp_184710.1 0 0.54 -2.76 -11.35 -9.04
Smp_110400.1 0 0.09 -0.79 -8.02 -8.98
Smp_184400.1 0 0.15 -4.14 -8.88 -8.88
Smp_205460.1 0 0.98 -3.11 -8.72 -8.72
Smp_183080.1 0 1.61 -2.18 -8.70 -8.70
Smp_165510.1 0 0.09 -3.88 -8.04 -8.63
Smp_095460.1 0 -0.21 -2.74 -7.08 -8.45
Smp_026160.2 0 0.93 -2.82 -7.30 -8.39
Smp_185560.1 0 0.07 -2.33 -8.32 -8.32
Smp_205780.1 0 1.12 -3.78 -8.26 -8.26
Smp_204660.1 0 1.01 -4.53 -7.96 -8.16
Smp_200770.1 0 1.89 0.38 -8.15 -8.15
Smp_201280.1 0 0.50 0.74 -4.14 -8.03
Smp_201940.1 0 1.70 -2.07 -7.99 -7.99
Smp_037540.1 0 -0.11 -2.67 -9.05 -7.89
Smp_178390.1 0 0.45 -1.39 -7.29 -7.87
Smp_205120.1 0 2.69 -1.75 -5.80 -7.84
Smp_178890.1 0 0.36 -2.67 -7.83 -7.83
Smp_186020.1 0 0.85 -2.69 -7.72 -7.80
Smp_032970.1 0 -0.24 -2.98 -11.57 -7.79
Smp_200470.1 0 1.40 -2.54 -7.67 -7.67
Smp_178170.1 0 1.66 -1.97 -7.62 -7.62
Smp_019000.1 0 2.12 -4.51 -7.54 -7.54
Smp_113310.1 0 1.47 -2.62 -5.78 -7.51
Smp_136600.1 0 0.07 -2.48 -5.77 -7.33
Smp_049300.4 0 1.54 -4.40 -4.53 -7.24
Smp_203920.1 0 0.58 -2.39 -6.11 -7.08
Smp_134770.1 0 0.04 -2.01 -4.85 -7.07
Smp_203790.1 0 1.11 -0.83 -4.01 -6.96
Smp_200480.1 0 1.75 -1.49 -6.94 -6.94
Smp_204460.1 0 1.62 -2.55 -6.93 -6.93
Smp_111340.9 0 1.30 0.22 -5.61 -6.61
Smp_159610.1 0 2.56 -4.50 -4.50 -6.59
Smp_193480.1 0 0.76 -0.20 -6.53 -6.53
Smp_204090.1 0 0.38 0.16 -4.38 -6.42
Smp_185440.1 0 -0.12 -1.84 -5.54 -6.28
Smp_201410.1 0 0.26 -6.26 -6.26 -6.26
Smp_117620.1 0 0.28 -4.02 -5.77 -6.24
Smp_074610.1 0 -0.17 -3.08 -8.53 -6.22
Smp_008390.1 0 0.53 -0.79 -6.20 -6.20
Smp_113550.1 0 0.10 -1.71 -6.16 -6.16
Smp_200160.1 0 0.65 -1.01 -6.08 -6.08
Smp_060760.1 0 3.40 -1.02 -6.08 -6.08
Smp_171700.1 0 2.41 -0.03 -2.60 -6.02
Smp_004530.1 0 -0.23 -3.64 -5.83 -5.83
Smp_184860.1 0 2.74 -0.82 -5.81 -5.81
Smp_158010.1 0 0.21 -0.51 -5.78 -5.78
Smp_203470.1 0 2.08 0.59 -0.78 -5.76
Smp_069220.1 0 1.51 -0.88 -4.10 -5.76
Smp_182090.1 0 0.34 -10.52 -4.07 -5.68
Smp_049300.2 0 0.52 -2.77 -4.62 -5.61
Smp_149750.1 0 1.75 -0.10 -5.34 -5.55
Smp_202580.1 0 1.24 0.71 -2.72 -5.55
Smp_015190.1 0 0.66 -0.56 -4.33 -5.46
Smp_089860.1 0 4.05 -0.23 -9.08 -5.43
Smp_202670.1 0 2.19 -3.90 -5.33 -5.33
Smp_147530.1 0 2.28 -0.50 -3.10 -5.24
Smp_030010.1 0 0.62 -6.53 -3.86 -5.21
Smp_200010.1 0 6.19 -0.25 -7.50 -5.12
Smp_201930.1 0 1.32 -0.08 -4.89 -5.07
Smp_061590.2 0 0.20 -1.67 -5.35 -5.03
Smp_171360.1 0 3.13 -2.66 -4.89 -4.89
Smp_205280.1 0 0.75 0.23 -4.69 -4.81
Smp_131830.1 0 1.24 0.03 -5.02 -4.76
Smp_182940.1 0 4.10 -0.33 -4.76 -4.76
Smp_000250.1 0 2.54 -1.10 -4.67 -4.67
Smp_038560.1 0 0.43 -3.62 -2.65 -4.65
Smp_108390.1 0 -0.09 -2.06 -5.55 -4.63
Smp_187010.1 0 0.47 -5.64 -3.81 -4.52
Smp_202720.1 0 1.95 -0.39 -4.65 -4.47
Smp_017080.3 0 1.61 -1.79 -3.44 -4.38
Smp_079960.1 0 1.02 -1.37 -4.93 -4.30
Smp_107590.1 0 4.34 2.46 -4.22 -4.22
Smp_049250.1 0 1.49 -2.10 -4.41 -4.17
Smp_136240.3 0 0.29 -2.67 -3.72 -4.15
Smp_082430.1 0 0.56 -9.20 -5.69 -4.14
Smp_097020.1 0 2.16 -2.18 -9.25 -3.98
Smp_094680.1 0 1.98 -4.03 -4.17 -3.96
Smp_123100.1 0 1.03 -1.57 -3.15 -3.94
Smp_130700.1 0 0.19 -1.83 -3.63 -3.85
Smp_020840.1 0 0.75 -4.50 -3.36 -3.70
Smp_033930.1 0 0.15 -3.24 -4.08 -3.67
Smp_202590.1 0 0.93 -0.68 -5.97 -3.65
Smp_080920.1 0 1.28 -1.93 -2.08 -3.64
Smp_201420.1 0 2.63 1.48 -3.49 -3.49
Smp_205000.1 0 4.78 1.99 -1.34 -3.44
Smp_056680.2 0 0.01 -3.20 -6.32 -3.44
Smp_056680.3 0 0.01 -3.20 -6.32 -3.44
Smp_201790.1 0 4.46 -3.38 -3.38 -3.38
Smp_196680.1 0 1.62 -1.20 -4.44 -3.36
Smp_106930.1 0 3.72 0.12 -3.92 -3.35
Smp_082240.1 0 -0.22 -3.45 -3.39 -3.32
Smp_148840.1 0 1.21 -1.89 -2.48 -3.29
Smp_080920.2 0 2.36 -1.44 -1.25 -3.25
Smp_189120.1 0 3.83 -0.95 -5.44 -3.13
Smp_072320.1 0 3.42 -1.99 -6.26 -3.11
Smp_163710.1 0 0.07 -4.89 -1.71 -2.93
Smp_103140.1 0 2.18 -1.88 -1.44 -2.80
Smp_124140.1 0 2.40 0.33 -1.66 -2.77
Smp_049300.3 0 1.86 -0.79 -4.47 -2.75
Smp_202560.1 0 4.87 -1.17 -2.65 -2.65
Smp_165050.1 0 0.40 -6.48 -1.35 -2.34
SmLINC06210-IBu 0 3.36 -0.61 -1.90 -1.98
Smp_200900.1 0 1.23 -4.76 -2.64 -1.93
Smp_202160.1 0 2.79 -1.17 -2.66 -1.06
Smp_204950.1 0 5.97 5.20 0.00 0.00
Smp_136240.5 0 8.50 0.00 0.00 0.00
Smp_143450.1 0 6.96 3.27 0.00 0.00
Smp_145100.1 0 5.41 1.47 0.00 0.00
Smp_129930.1 0 7.26 0.00 0.00 0.00
Smp_177380.1 0 7.51 1.65 4.19 0.67
Smp_204190.1 0 3.21 -3.16 -0.75 1.19
Smp_204650.1 0 7.45 2.61 0.00 2.29
Smp_201000.1 0 6.84 0.00 2.13 2.38

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_000250.1 SmLINC06210-IBu 0.96 7.28e-09 1.73e-06
Smp_004530.1 SmLINC06210-IBu 0.82 1.00e-04 2.00e-03
Smp_008390.1 SmLINC06210-IBu 0.83 9.69e-05 1.30e-03
Smp_015190.1 SmLINC06210-IBu 0.84 8.80e-05 1.20e-03
Smp_017080.3 SmLINC06210-IBu 0.93 2.87e-07 2.13e-05
Smp_019000.1 SmLINC06210-IBu 0.98 5.55e-11 7.34e-08
Smp_020840.1 SmLINC06210-IBu 0.93 2.93e-07 2.17e-05
Smp_026160.2 SmLINC06210-IBu 0.85 5.60e-05 9.00e-04
Smp_030010.1 SmLINC06210-IBu 0.89 7.12e-06 2.00e-04
Smp_032320.1 SmLINC06210-IBu 0.90 3.19e-06 1.00e-04
Smp_032970.1 SmLINC06210-IBu 0.81 1.00e-04 2.30e-03
Smp_033930.1 SmLINC06210-IBu 0.81 1.00e-04 2.20e-03
Smp_035200.3 SmLINC06210-IBu 0.82 1.00e-04 1.90e-03
Smp_037540.1 SmLINC06210-IBu 0.80 2.00e-04 3.10e-03
Smp_038560.1 SmLINC06210-IBu 0.88 8.86e-06 2.00e-04
Smp_049250.1 SmLINC06210-IBu 0.95 2.90e-08 4.40e-06
Smp_049300.2 SmLINC06210-IBu 0.83 1.00e-04 1.40e-03
Smp_049300.3 SmLINC06210-IBu 0.95 1.69e-08 3.04e-06
Smp_049300.4 SmLINC06210-IBu 0.93 2.33e-07 1.84e-05
Smp_056680.2 SmLINC06210-IBu 0.81 2.00e-04 2.60e-03
Smp_056680.3 SmLINC06210-IBu 0.81 2.00e-04 2.60e-03
Smp_060760.1 SmLINC06210-IBu 0.93 3.28e-07 2.34e-05
Smp_061590.2 SmLINC06210-IBu 0.85 5.69e-05 9.00e-04
Smp_069220.1 SmLINC06210-IBu 0.89 8.12e-06 2.00e-04
Smp_072320.1 SmLINC06210-IBu 0.96 1.09e-08 2.26e-06
Smp_074610.1 SmLINC06210-IBu 0.80 2.00e-04 2.90e-03
Smp_079960.1 SmLINC06210-IBu 0.87 1.54e-05 3.00e-04
Smp_080920.1 SmLINC06210-IBu 0.97 6.69e-10 3.63e-07
Smp_080920.2 SmLINC06210-IBu 0.99 1.20e-12 6.69e-09
Smp_082240.1 SmLINC06210-IBu 0.82 1.00e-04 1.90e-03
Smp_082430.1 SmLINC06210-IBu 0.82 1.00e-04 2.00e-03
Smp_089860.1 SmLINC06210-IBu 0.99 7.06e-14 1.18e-09
Smp_094680.1 SmLINC06210-IBu 0.98 5.17e-11 7.01e-08
Smp_095460.1 SmLINC06210-IBu 0.83 1.00e-04 1.40e-03
Smp_097020.1 SmLINC06210-IBu 0.96 7.93e-09 1.83e-06
Smp_103140.1 SmLINC06210-IBu 0.86 3.33e-05 6.00e-04
Smp_106930.1 SmLINC06210-IBu 0.96 6.12e-09 1.54e-06
Smp_107590.1 SmLINC06210-IBu 0.92 6.54e-07 3.80e-05
Smp_108390.1 SmLINC06210-IBu 0.82 1.00e-04 1.70e-03
Smp_110400.1 SmLINC06210-IBu 0.87 1.56e-05 3.00e-04
Smp_111340.6 SmLINC06210-IBu 0.94 7.60e-08 8.50e-06
Smp_111340.9 SmLINC06210-IBu 0.95 1.51e-08 2.82e-06
Smp_111640.1 SmLINC06210-IBu 0.88 9.03e-06 2.00e-04
Smp_112090.1 SmLINC06210-IBu 0.85 5.99e-05 9.00e-04
Smp_113310.1 SmLINC06210-IBu 0.95 4.00e-08 5.48e-06
Smp_113550.1 SmLINC06210-IBu 0.80 2.00e-04 2.80e-03
Smp_117620.1 SmLINC06210-IBu 0.84 6.02e-05 9.00e-04
Smp_123100.1 SmLINC06210-IBu 0.95 5.00e-08 6.38e-06
Smp_124140.1 SmLINC06210-IBu 0.99 4.04e-15 1.99e-10
Smp_125070.1 SmLINC06210-IBu 0.86 2.93e-05 5.00e-04
Smp_129930.1 SmLINC06210-IBu 0.82 1.00e-04 2.00e-03
Smp_130700.1 SmLINC06210-IBu 0.81 1.00e-04 2.20e-03
Smp_131830.1 SmLINC06210-IBu 0.92 7.20e-07 4.06e-05
Smp_134770.1 SmLINC06210-IBu 0.84 6.40e-05 1.00e-03
Smp_136240.3 SmLINC06210-IBu 0.80 2.00e-04 3.10e-03
Smp_136240.5 SmLINC06210-IBu 0.92 8.44e-07 4.55e-05
Smp_136600.1 SmLINC06210-IBu 0.83 1.00e-04 1.60e-03
Smp_143450.1 SmLINC06210-IBu 0.83 1.00e-04 1.60e-03
Smp_145100.1 SmLINC06210-IBu 0.85 4.81e-05 8.00e-04
Smp_147530.1 SmLINC06210-IBu 0.98 6.69e-11 8.26e-08
Smp_148840.1 SmLINC06210-IBu 0.87 2.14e-05 4.00e-04
Smp_149750.1 SmLINC06210-IBu 0.94 1.07e-07 1.07e-05
Smp_150070.1 SmLINC06210-IBu 0.80 2.00e-04 2.90e-03
Smp_158010.1 SmLINC06210-IBu 0.82 1.00e-04 1.70e-03
Smp_159610.1 SmLINC06210-IBu 0.99 1.84e-14 5.12e-10
Smp_163710.1 SmLINC06210-IBu 0.87 2.45e-05 5.00e-04
Smp_165050.1 SmLINC06210-IBu 0.88 1.39e-05 3.00e-04
Smp_165510.1 SmLINC06210-IBu 0.85 4.68e-05 8.00e-04
Smp_171360.1 SmLINC06210-IBu 0.99 1.56e-13 1.89e-09
Smp_171700.1 SmLINC06210-IBu 0.97 1.02e-09 4.79e-07
Smp_177380.1 SmLINC06210-IBu 0.96 2.75e-09 9.09e-07
Smp_178170.1 SmLINC06210-IBu 0.97 2.00e-10 1.66e-07
Smp_178390.1 SmLINC06210-IBu 0.86 3.59e-05 6.00e-04
Smp_178890.1 SmLINC06210-IBu 0.80 2.00e-04 2.90e-03
Smp_182090.1 SmLINC06210-IBu 0.88 9.23e-06 2.00e-04
Smp_182940.1 SmLINC06210-IBu 0.98 2.01e-11 3.86e-08
Smp_183080.1 SmLINC06210-IBu 0.83 1.00e-04 1.40e-03
Smp_184400.1 SmLINC06210-IBu 0.80 2.00e-04 3.00e-03
Smp_184710.1 SmLINC06210-IBu 0.91 1.32e-06 6.28e-05
Smp_184860.1 SmLINC06210-IBu 0.94 6.48e-08 7.61e-06
Smp_185170.1 SmLINC06210-IBu 0.87 2.05e-05 4.00e-04
Smp_185440.1 SmLINC06210-IBu 0.83 1.00e-04 1.60e-03
Smp_185560.1 SmLINC06210-IBu 0.84 8.52e-05 1.20e-03
Smp_185680.1 SmLINC06210-IBu 0.97 6.12e-10 3.43e-07
Smp_185830.1 SmLINC06210-IBu 0.95 2.14e-08 3.58e-06
Smp_186020.1 SmLINC06210-IBu 0.94 1.07e-07 1.07e-05
Smp_187010.1 SmLINC06210-IBu 0.82 1.00e-04 2.10e-03
Smp_189120.1 SmLINC06210-IBu 0.97 1.61e-09 6.43e-07
Smp_193480.1 SmLINC06210-IBu 0.81 2.00e-04 2.50e-03
Smp_196680.1 SmLINC06210-IBu 0.89 6.36e-06 1.00e-04
Smp_200010.1 SmLINC06210-IBu 0.99 4.03e-13 3.38e-09
Smp_200160.1 SmLINC06210-IBu 0.89 5.67e-06 1.00e-04
Smp_200470.1 SmLINC06210-IBu 0.96 3.29e-09 1.02e-06
Smp_200480.1 SmLINC06210-IBu 0.80 2.00e-04 3.00e-03
Smp_200770.1 SmLINC06210-IBu 0.96 2.84e-09 9.29e-07
Smp_200900.1 SmLINC06210-IBu 0.92 1.15e-06 5.68e-05
Smp_201000.1 SmLINC06210-IBu 0.96 8.93e-09 1.98e-06
Smp_201280.1 SmLINC06210-IBu 0.80 2.00e-04 3.00e-03
Smp_201410.1 SmLINC06210-IBu 0.83 1.00e-04 1.60e-03
Smp_201420.1 SmLINC06210-IBu 0.94 1.63e-07 1.44e-05
Smp_201790.1 SmLINC06210-IBu 0.99 1.38e-13 1.77e-09
Smp_201930.1 SmLINC06210-IBu 0.96 2.83e-09 9.26e-07
Smp_201940.1 SmLINC06210-IBu 0.94 1.42e-07 1.31e-05
Smp_202160.1 SmLINC06210-IBu 0.93 3.81e-07 2.60e-05
Smp_202490.1 SmLINC06210-IBu 0.88 1.40e-05 3.00e-04
Smp_202560.1 SmLINC06210-IBu 0.89 5.71e-06 1.00e-04
Smp_202580.1 SmLINC06210-IBu 0.84 7.58e-05 1.10e-03
Smp_202590.1 SmLINC06210-IBu 0.84 7.94e-05 1.10e-03
Smp_202670.1 SmLINC06210-IBu 0.97 3.26e-10 2.29e-07
Smp_202720.1 SmLINC06210-IBu 0.86 2.70e-05 5.00e-04
Smp_203470.1 SmLINC06210-IBu 0.90 4.12e-06 1.00e-04
Smp_203790.1 SmLINC06210-IBu 0.87 2.46e-05 5.00e-04
Smp_203920.1 SmLINC06210-IBu 0.91 1.80e-06 7.82e-05
Smp_204090.1 SmLINC06210-IBu 0.81 1.00e-04 2.10e-03
Smp_204190.1 SmLINC06210-IBu 0.94 9.80e-08 1.01e-05
Smp_204360.1 SmLINC06210-IBu 0.93 4.23e-07 2.80e-05
Smp_204460.1 SmLINC06210-IBu 0.96 7.97e-09 1.83e-06
Smp_204650.1 SmLINC06210-IBu 0.98 5.22e-11 7.06e-08
Smp_204660.1 SmLINC06210-IBu 0.95 4.54e-08 5.98e-06
Smp_204950.1 SmLINC06210-IBu 0.84 8.87e-05 1.20e-03
Smp_205000.1 SmLINC06210-IBu 0.86 3.80e-05 6.00e-04
Smp_205120.1 SmLINC06210-IBu 0.98 4.83e-11 6.70e-08
Smp_205280.1 SmLINC06210-IBu 0.88 1.01e-05 2.00e-04
Smp_205450.1 SmLINC06210-IBu 0.87 1.72e-05 3.00e-04
Smp_205460.1 SmLINC06210-IBu 0.95 2.79e-08 4.28e-06
Smp_205480.1 SmLINC06210-IBu 0.82 1.00e-04 1.70e-03
Smp_205780.1 SmLINC06210-IBu 0.87 1.83e-05 4.00e-04
Smp_205930.1 SmLINC06210-IBu 0.90 4.61e-06 1.00e-04
Fig. S5 for SmLINC06210-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_032320.1 0 1.14 -10.97 -10.97 -10.97
Smp_185680.1 0 1.75 -5.39 -10.59 -10.59
Smp_204360.1 0 0.81 -0.39 -6.29 -10.08
Smp_184710.1 0 0.54 -2.76 -11.35 -9.04
SmLINC06210-IBu 0 3.36 -0.61 -1.90 -1.98

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_032320.1 SmLINC06210-IBu 0.90 3.19e-06 1.00e-04
Smp_184710.1 SmLINC06210-IBu 0.91 1.32e-06 6.51e-05
Smp_185680.1 SmLINC06210-IBu 0.97 6.12e-10 3.72e-07
Smp_185830.1 SmLINC06210-IBu 0.95 2.14e-08 3.81e-06
Smp_204360.1 SmLINC06210-IBu 0.93 4.23e-07 2.92e-05