Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06205-IBu Data

Chromosome: SC 0137 - Coordinate: SC 0137:369236-375586 - Strand: +


Fig. 7A S3 for SmLINC06205-IBu with r ≥ 0.5 or r ≤ -0.5..

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_060420.5 0 -1.67 -0.43 2.87 2.81
SmLINC06205-IBu 0 0.00 7.73 9.47 9.16

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_060420.5 SmLINC06205-IBu 0.76 8.00e-04 5.60e-03
Fig. 6A for SmLINC06205-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_145640.1 0 -3.04 -1.70 2.01 0.98
Smp_122820.1 0 -2.40 -0.05 3.18 1.42
Smp_126820.1 0 -2.21 -1.00 2.57 1.53
Smp_161770.1 0 -3.68 -0.22 3.06 1.67
Smp_151600.1 0 -1.61 0.12 3.00 2.12
Smp_098450.2 0 -2.98 -0.28 2.33 2.12
Smp_130020.1 0 -2.15 -0.46 2.56 2.19
Smp_155150.1 0 -2.11 -1.47 2.73 2.21
Smp_210960.1 0 -0.60 -0.79 3.00 2.27
Smp_000580.1 0 -1.78 0.39 3.13 2.34
Smp_087560.1 0 -1.47 0.14 3.27 2.46
Smp_213660.1 0 -1.27 -0.27 3.06 2.53
Smp_150650.1 0 -1.55 -2.38 2.91 2.59
Smp_179920.1 0 -3.86 -1.02 3.48 2.62
Smp_137580.1 0 -0.70 0.39 3.72 2.66
Smp_130450.1 0 1.37 3.17 5.25 2.70
Smp_166660.1 0 -0.94 0.57 3.33 2.70
Smp_203310.1 0 -0.98 -0.17 3.50 2.70
Smp_121580.1 0 -0.85 1.52 3.91 2.71
Smp_160340.1 0 -3.10 -3.10 3.19 2.73
Smp_131620.1 0 -1.18 0.80 3.92 2.80
Smp_051290.1 0 -1.01 0.27 3.55 2.84
Smp_126000.1 0 -1.03 0.15 3.20 2.84
Smp_032720.1 0 -2.04 -0.98 3.51 2.88
Smp_141280.1 0 -0.60 1.79 3.78 2.89
Smp_180290.1 0 -1.81 1.22 3.71 3.06
Smp_191730.1 0 -0.55 1.60 4.01 3.12
Smp_138330.1 0 -0.83 1.18 3.44 3.18
Smp_136000.1 0 -1.50 0.88 3.88 3.20
Smp_172630.1 0 1.02 -2.39 3.98 3.22
Smp_063630.1 0 -1.74 0.18 2.85 3.22
Smp_037510.1 0 -0.07 1.78 4.35 3.30
Smp_157620.1 0 -1.34 2.10 4.24 3.31
Smp_074280.1 0 -3.10 -0.51 3.77 3.35
Smp_173510.1 0 -1.66 2.86 4.06 3.37
Smp_126250.1 0 -2.91 -3.05 3.55 3.61
Smp_130140.1 0 -0.37 1.69 4.29 3.64
Smp_160070.1 0 -0.05 1.66 4.26 3.69
Smp_161330.1 0 0.30 0.81 4.69 3.77
Smp_085990.1 0 -0.18 0.76 4.54 3.80
Smp_155350.1 0 -1.34 2.37 4.33 3.81
Smp_180580.1 0 -0.58 2.01 4.36 3.83
Smp_026930.1 0 0.83 2.85 4.55 3.87
Smp_138940.1 0 0.74 3.03 5.36 3.89
Smp_204780.1 0 1.58 -0.95 4.26 3.94
Smp_124080.1 0 -1.10 0.05 4.45 3.94
Smp_149890.1 0 -0.27 1.36 4.10 3.95
Smp_150550.1 0 0.19 2.38 4.83 3.98
Smp_068710.1 0 -0.37 1.37 3.96 4.03
Smp_176950.1 0 0.71 3.37 5.65 4.06
Smp_123190.1 0 -0.22 0.53 3.96 4.06
Smp_160130.1 0 -0.87 0.97 4.70 4.12
Smp_134440.1 0 -0.08 2.08 4.88 4.18
Smp_124740.1 0 1.26 3.69 5.89 4.22
Smp_029480.1 0 0.09 1.95 4.84 4.25
Smp_158350.1 0 0.58 3.00 4.31 4.30
Smp_197950.1 0 0.56 2.31 4.65 4.35
Smp_193010.1 0 -1.87 2.99 4.70 4.54
Smp_197700.1 0 -1.61 0.76 4.30 4.54
Smp_131980.1 0 1.81 3.27 5.90 4.61
Smp_128220.1 0 1.22 3.66 5.71 4.61
Smp_143260.1 0 1.86 3.76 5.70 4.66
Smp_158550.1 0 1.93 2.76 4.63 4.68
Smp_128760.1 0 0.19 3.77 6.17 4.68
Smp_048380.1 0 -0.03 3.50 5.63 4.71
Smp_157050.1 0 1.27 3.15 5.87 4.71
Smp_096560.1 0 0.31 0.72 4.48 4.75
Smp_150990.1 0 0.68 3.65 5.20 4.86
Smp_175390.1 0 1.03 3.77 5.71 4.93
Smp_164070.1 0 2.51 0.90 5.03 4.93
Smp_137130.1 0 0.81 3.24 4.81 4.94
Smp_144620.1 0 0.18 4.26 6.65 4.96
Smp_154050.1 0 0.35 -0.27 5.30 5.00
Smp_143950.1 0 1.26 3.86 6.54 5.02
Smp_199250.1 0 1.51 2.36 4.75 5.05
Smp_126060.1 0 1.13 4.16 5.21 5.07
Smp_061100.1 0 -0.36 -0.27 5.21 5.08
Smp_148820.1 0 2.05 1.32 5.45 5.27
Smp_010380.1 0 1.17 2.73 4.90 5.33
Smp_158880.1 0 1.21 5.25 6.12 5.41
Smp_151540.1 0 1.27 2.25 5.84 5.46
Smp_019620.1 0 3.06 4.55 5.37 5.48
Smp_093110.1 0 -1.40 -1.41 6.90 5.51
Smp_194750.1 0 -2.65 -2.65 4.98 5.54
Smp_148680.1 0 0.54 1.16 5.57 5.54
Smp_145460.1 0 1.47 4.12 6.10 5.55
Smp_139200.1 0 0.96 4.00 6.89 5.56
Smp_175770.1 0 3.08 4.56 5.55 5.56
Smp_132830.1 0 3.68 4.20 6.74 5.62
Smp_164570.1 0 2.20 3.12 5.53 5.64
Smp_010660.1 0 3.34 4.59 5.63 5.67
Smp_178070.1 0 2.15 4.53 5.96 5.70
Smp_202530.1 0 2.14 3.78 6.30 5.73
Smp_143590.1 0 2.35 2.75 7.37 5.76
Smp_202510.1 0 3.21 4.73 6.49 5.80
Smp_155820.1 0 0.58 3.71 5.77 5.87
Smp_187750.1 0 2.17 4.12 6.59 5.90
Smp_204230.1 0 1.81 5.30 7.10 6.01
Smp_143970.1 0 0.11 -0.34 5.95 6.02
Smp_133640.1 0 -1.09 0.40 6.38 6.04
Smp_043860.1 0 2.13 3.10 6.52 6.10
Smp_124590.1 0 0.36 3.82 6.24 6.11
Smp_210040.1 0 -2.65 2.05 7.59 6.23
Smp_134380.1 0 2.77 4.12 7.09 6.35
Smp_160840.1 0 4.00 0.00 6.72 6.48
Smp_157640.1 0 2.58 4.01 7.16 6.51
Smp_065210.2 0 0.55 4.65 7.31 6.71
Smp_170780.1 0 1.33 3.45 6.78 6.74
Smp_205720.1 0 3.07 5.92 6.77 6.82
Smp_177010.1 0 0.05 2.90 7.39 6.83
Smp_205760.1 0 1.50 -1.44 6.95 6.99
Smp_000210.1 0 4.25 5.14 7.65 7.33
Smp_148910.1 0 2.41 5.00 8.75 7.52
Smp_049850.1 0 3.42 2.91 8.43 7.53
Smp_132440.2 0 4.00 6.60 8.31 7.55
Smp_041210.1 0 0.00 6.71 9.74 8.02
Smp_157060.1 0 0.00 1.49 9.03 8.34
Smp_201090.1 0 2.29 7.22 9.83 8.78
SmLINC06205-IBu 0 0.00 7.73 9.47 9.16
Smp_164550.1 0 5.78 6.30 11.08 9.99
Smp_034980.2 0 8.75 0.00 11.30 11.03

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_000210.1 SmLINC06205-IBu 0.81 2.00e-04 2.70e-03
Smp_000580.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_010380.1 SmLINC06205-IBu 0.80 2.00e-04 2.90e-03
Smp_010660.1 SmLINC06205-IBu 0.80 2.00e-04 2.90e-03
Smp_019620.1 SmLINC06205-IBu 0.87 2.35e-05 4.00e-04
Smp_026930.1 SmLINC06205-IBu 0.80 3.00e-04 3.20e-03
Smp_029480.1 SmLINC06205-IBu 0.83 1.00e-04 1.50e-03
Smp_032720.1 SmLINC06205-IBu 0.80 3.00e-04 3.20e-03
Smp_034980.2 SmLINC06205-IBu 0.81 1.00e-04 2.30e-03
Smp_037510.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_041210.1 SmLINC06205-IBu 0.85 5.41e-05 9.00e-04
Smp_043860.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_048380.1 SmLINC06205-IBu 0.81 1.00e-04 2.30e-03
Smp_049850.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_051290.1 SmLINC06205-IBu 0.84 8.77e-05 1.20e-03
Smp_061100.1 SmLINC06205-IBu 0.80 3.00e-04 3.30e-03
Smp_063630.1 SmLINC06205-IBu 0.82 1.00e-04 1.80e-03
Smp_065210.2 SmLINC06205-IBu 0.83 1.00e-04 1.40e-03
Smp_068710.1 SmLINC06205-IBu 0.84 8.29e-05 1.20e-03
Smp_074280.1 SmLINC06205-IBu 0.87 2.01e-05 4.00e-04
Smp_085990.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_087560.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_093110.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_096560.1 SmLINC06205-IBu 0.80 3.00e-04 3.20e-03
Smp_098450.2 SmLINC06205-IBu 0.91 1.56e-06 7.05e-05
Smp_121580.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_122820.1 SmLINC06205-IBu 0.80 3.00e-04 3.10e-03
Smp_123190.1 SmLINC06205-IBu 0.84 8.31e-05 1.20e-03
Smp_124080.1 SmLINC06205-IBu 0.81 2.00e-04 2.60e-03
Smp_124590.1 SmLINC06205-IBu 0.84 8.27e-05 1.20e-03
Smp_124740.1 SmLINC06205-IBu 0.81 2.00e-04 2.60e-03
Smp_126000.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_126060.1 SmLINC06205-IBu 0.82 1.00e-04 1.80e-03
Smp_126250.1 SmLINC06205-IBu 0.81 1.00e-04 2.30e-03
Smp_126820.1 SmLINC06205-IBu 0.84 7.12e-05 1.10e-03
Smp_128220.1 SmLINC06205-IBu 0.80 2.00e-04 3.10e-03
Smp_128760.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_130020.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_130140.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_130450.1 SmLINC06205-IBu 0.84 7.48e-05 1.10e-03
Smp_131620.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_131980.1 SmLINC06205-IBu 0.84 7.90e-05 1.10e-03
Smp_132440.2 SmLINC06205-IBu 0.81 2.00e-04 2.50e-03
Smp_132830.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_133640.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_134380.1 SmLINC06205-IBu 0.80 2.00e-04 3.10e-03
Smp_134440.1 SmLINC06205-IBu 0.81 2.00e-04 2.40e-03
Smp_136000.1 SmLINC06205-IBu 0.82 1.00e-04 1.90e-03
Smp_137130.1 SmLINC06205-IBu 0.85 5.50e-05 9.00e-04
Smp_137580.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_138330.1 SmLINC06205-IBu 0.85 5.09e-05 8.00e-04
Smp_138940.1 SmLINC06205-IBu 0.82 1.00e-04 1.70e-03
Smp_139200.1 SmLINC06205-IBu 0.81 2.00e-04 2.50e-03
Smp_141280.1 SmLINC06205-IBu 0.85 4.37e-05 7.00e-04
Smp_143260.1 SmLINC06205-IBu 0.81 1.00e-04 2.30e-03
Smp_143590.1 SmLINC06205-IBu 0.81 2.00e-04 2.70e-03
Smp_143950.1 SmLINC06205-IBu 0.84 8.36e-05 1.20e-03
Smp_143970.1 SmLINC06205-IBu 0.87 1.79e-05 4.00e-04
Smp_144620.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_145460.1 SmLINC06205-IBu 0.80 3.00e-04 3.10e-03
Smp_145640.1 SmLINC06205-IBu 0.82 1.00e-04 1.90e-03
Smp_148680.1 SmLINC06205-IBu 0.86 3.50e-05 6.00e-04
Smp_148820.1 SmLINC06205-IBu 0.82 1.00e-04 1.70e-03
Smp_148910.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_149890.1 SmLINC06205-IBu 0.85 4.58e-05 8.00e-04
Smp_150550.1 SmLINC06205-IBu 0.82 1.00e-04 1.90e-03
Smp_150650.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_150990.1 SmLINC06205-IBu 0.91 1.93e-06 8.21e-05
Smp_151540.1 SmLINC06205-IBu 0.80 3.00e-04 3.30e-03
Smp_151600.1 SmLINC06205-IBu 0.82 1.00e-04 2.00e-03
Smp_154050.1 SmLINC06205-IBu 0.80 3.00e-04 3.30e-03
Smp_155150.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_155350.1 SmLINC06205-IBu 0.80 3.00e-04 3.10e-03
Smp_155820.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_157050.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_157060.1 SmLINC06205-IBu 0.81 2.00e-04 2.70e-03
Smp_157620.1 SmLINC06205-IBu 0.81 2.00e-04 2.60e-03
Smp_157640.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_158350.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_158550.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_158880.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_160070.1 SmLINC06205-IBu 0.80 3.00e-04 3.30e-03
Smp_160130.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_160340.1 SmLINC06205-IBu 0.85 4.06e-05 7.00e-04
Smp_160840.1 SmLINC06205-IBu 0.86 2.86e-05 5.00e-04
Smp_161330.1 SmLINC06205-IBu 0.81 2.00e-04 2.40e-03
Smp_161770.1 SmLINC06205-IBu 0.82 1.00e-04 2.00e-03
Smp_164070.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_164550.1 SmLINC06205-IBu 0.80 2.00e-04 2.80e-03
Smp_164570.1 SmLINC06205-IBu 0.81 2.00e-04 2.40e-03
Smp_166660.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_170780.1 SmLINC06205-IBu 0.86 2.56e-05 5.00e-04
Smp_172630.1 SmLINC06205-IBu 0.80 3.00e-04 3.20e-03
Smp_173510.1 SmLINC06205-IBu 0.83 1.00e-04 1.40e-03
Smp_175390.1 SmLINC06205-IBu 0.82 1.00e-04 2.10e-03
Smp_175770.1 SmLINC06205-IBu 0.82 1.00e-04 2.00e-03
Smp_176950.1 SmLINC06205-IBu 0.80 2.00e-04 2.90e-03
Smp_177010.1 SmLINC06205-IBu 0.80 3.00e-04 3.20e-03
Smp_178070.1 SmLINC06205-IBu 0.82 1.00e-04 1.70e-03
Smp_179920.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_180290.1 SmLINC06205-IBu 0.81 2.00e-04 2.60e-03
Smp_180580.1 SmLINC06205-IBu 0.84 7.11e-05 1.10e-03
Smp_187750.1 SmLINC06205-IBu 0.85 4.79e-05 8.00e-04
Smp_191730.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_193010.1 SmLINC06205-IBu 0.82 1.00e-04 2.00e-03
Smp_194750.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_197700.1 SmLINC06205-IBu 0.81 2.00e-04 2.50e-03
Smp_197950.1 SmLINC06205-IBu 0.81 2.00e-04 2.30e-03
Smp_199250.1 SmLINC06205-IBu 0.81 2.00e-04 2.50e-03
Smp_201090.1 SmLINC06205-IBu 0.84 7.26e-05 1.10e-03
Smp_202510.1 SmLINC06205-IBu 0.81 2.00e-04 2.70e-03
Smp_202530.1 SmLINC06205-IBu 0.80 2.00e-04 3.10e-03
Smp_203310.1 SmLINC06205-IBu 0.83 1.00e-04 1.50e-03
Smp_204230.1 SmLINC06205-IBu 0.83 9.32e-05 1.30e-03
Smp_204780.1 SmLINC06205-IBu 0.82 1.00e-04 1.80e-03
Smp_205720.1 SmLINC06205-IBu 0.81 1.00e-04 2.20e-03
Smp_205760.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_210040.1 SmLINC06205-IBu 0.80 3.00e-04 3.40e-03
Smp_210960.1 SmLINC06205-IBu 0.80 2.00e-04 3.00e-03
Smp_213660.1 SmLINC06205-IBu 0.80 3.00e-04 3.10e-03