Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06109-IBu Data

Chromosome: SC 0126 - Coordinate: SC 0126:79383-89185 - Strand: -


Fig. S5 for SmLINC06109-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_033050.2 0 0.00 -0.84 -2.77 -10.32
SmLINC06109-IBu 0 -0.15 -1.21 -4.51 -4.32
Smp_052280.2 0 4.60 9.23 11.90 12.79

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_033050.2 SmLINC06109-IBu 0.90 2.95e-06 1.00e-04
Smp_052280.2 SmLINC06109-IBu -0.91 1.65e-06 7.62e-05