Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC06039-IBu Data

Chromosome: SC 0125 - Coordinate: SC 0125:186460-188430 - Strand: -


Fig. S5 for SmLINC06039-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48
SmLINC06039-IBu 0 4.57 7.66 4.22 0.00
Smp_138080.1 0 4.97 10.75 -3.79 3.75

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_138080.1 SmLINC06039-IBu 0.93 3.34e-07 2.48e-05
Smp_159070.3 SmLINC06039-IBu 0.91 2.51e-06 1.00e-04