Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC06035-IBu Data

Chromosome: SC 0125 - Coordinate: SC 0125:182723-185642 - Strand: +

Fig. S5 for SmLINC06035-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
SmLINC06035-IBu 0 2.66 3.30 -3.07 -0.36
Smp_062070.1 0 9.47 10.97 6.18 8.79
Smp_103540.1 0 11.43 12.63 8.84 9.65

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_062070.1 SmLINC06035-IBu 0.90 3.01e-06 1.00e-04
Smp_103540.1 SmLINC06035-IBu 0.92 1.14e-06 5.87e-05