Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC05316-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:39319990-39324824 - Strand: +


Fig. S5 for SmLINC05316-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC05316-IBu 0 0.00 0.00 7.69 6.89
Smp_170280.1 0 2.81 5.87 10.21 9.37
Smp_068270.1 0 0.21 0.34 12.30 11.22

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_068270.1 SmLINC05316-IBu 0.94 1.14e-07 1.18e-05
Smp_170280.1 SmLINC05316-IBu 0.90 2.86e-06 1.00e-04