Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC05297-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:38816905-38817570 - Strand: -


Fig. S5 for SmLINC05297-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_206250.1 0 -0.30 -1.54 -11.39 -11.39
Smp_176230.2 0 0.48 -0.91 -5.65 -11.30
SmLINC05297-IBu 0 -0.00 -1.64 -3.66 -7.01

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_176230.2 SmLINC05297-IBu 0.91 1.50e-06 7.11e-05
Smp_206250.1 SmLINC05297-IBu 0.92 8.32e-07 4.69e-05