Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC05178-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:35473984-35482970 - Strand: +


Fig. 6A for SmLINC05178-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_193700.1 0 2.00 0.59 -11.32 -11.32
Smp_176230.2 0 0.48 -0.91 -5.65 -11.30
Smp_193990.1 0 2.54 2.04 -11.18 -11.18
Smp_125070.1 0 0.25 -4.98 -10.91 -10.91
Smp_111340.6 0 0.97 -0.72 -7.78 -9.70
Smp_179670.1 0 1.45 -1.30 -8.21 -9.30
Smp_184710.1 0 0.54 -2.76 -11.35 -9.04
Smp_035020.1 0 1.34 -0.55 -3.54 -8.45
Smp_200770.1 0 1.89 0.38 -8.15 -8.15
Smp_205120.1 0 2.69 -1.75 -5.80 -7.84
Smp_186020.1 0 0.85 -2.69 -7.72 -7.80
Smp_019000.1 0 2.12 -4.51 -7.54 -7.54
Smp_113310.1 0 1.47 -2.62 -5.78 -7.51
Smp_049300.4 0 1.54 -4.40 -4.53 -7.24
Smp_200480.1 0 1.75 -1.49 -6.94 -6.94
Smp_204460.1 0 1.62 -2.55 -6.93 -6.93
Smp_021460.1 0 1.05 -0.56 -1.99 -6.60
Smp_159610.1 0 2.56 -4.50 -4.50 -6.59
Smp_008390.1 0 0.53 -0.79 -6.20 -6.20
Smp_060760.1 0 3.40 -1.02 -6.08 -6.08
Smp_062080.1 0 0.17 -4.18 -7.09 -5.78
Smp_069220.1 0 1.51 -0.88 -4.10 -5.76
Smp_203470.1 0 2.08 0.59 -0.78 -5.76
Smp_149750.1 0 1.75 -0.10 -5.34 -5.55
Smp_015190.1 0 0.66 -0.56 -4.33 -5.46
Smp_089860.1 0 4.05 -0.23 -9.08 -5.43
Smp_202670.1 0 2.19 -3.90 -5.33 -5.33
SmLINC05178-IBu 0 3.85 -0.08 -1.72 -5.31
Smp_147530.1 0 2.28 -0.50 -3.10 -5.24
Smp_200010.1 0 6.19 -0.25 -7.50 -5.12
Smp_171360.1 0 3.13 -2.66 -4.89 -4.89
Smp_182940.1 0 4.10 -0.33 -4.76 -4.76
Smp_202990.1 0 3.06 1.30 -2.66 -4.70
Smp_000250.1 0 2.54 -1.10 -4.67 -4.67
Smp_202780.1 0 1.88 -4.59 -1.14 -4.59
Smp_187010.1 0 0.47 -5.64 -3.81 -4.52
Smp_202720.1 0 1.95 -0.39 -4.65 -4.47
Smp_017080.3 0 1.61 -1.79 -3.44 -4.38
Smp_079960.1 0 1.02 -1.37 -4.93 -4.30
Smp_107590.1 0 4.34 2.46 -4.22 -4.22
Smp_049250.1 0 1.49 -2.10 -4.41 -4.17
Smp_005080.1 0 0.96 -0.03 -3.26 -4.08
Smp_079280.1 0 1.10 0.35 -2.96 -4.05
Smp_097020.1 0 2.16 -2.18 -9.25 -3.98
Smp_094680.1 0 1.98 -4.03 -4.17 -3.96
Smp_202030.1 0 2.08 0.51 -3.93 -3.93
Smp_159350.1 0 0.30 -0.77 -3.51 -3.83
Smp_033930.1 0 0.15 -3.24 -4.08 -3.67
Smp_080920.1 0 1.28 -1.93 -2.08 -3.64
Smp_142460.1 0 1.61 0.48 -3.34 -3.60
Smp_188780.1 0 0.05 -9.06 -3.40 -3.54
Smp_205000.1 0 4.78 1.99 -1.34 -3.44
Smp_201790.1 0 4.46 -3.38 -3.38 -3.38
Smp_196680.1 0 1.62 -1.20 -4.44 -3.36
Smp_106930.1 0 3.72 0.12 -3.92 -3.35
Smp_164270.1 0 1.19 0.27 -2.73 -3.35
Smp_148840.1 0 1.21 -1.89 -2.48 -3.29
Smp_080920.2 0 2.36 -1.44 -1.25 -3.25
Smp_189120.1 0 3.83 -0.95 -5.44 -3.13
Smp_072320.1 0 3.42 -1.99 -6.26 -3.11
Smp_084210.1 0 0.94 -0.62 -4.01 -2.94
Smp_103140.1 0 2.18 -1.88 -1.44 -2.80
Smp_124140.1 0 2.40 0.33 -1.66 -2.77
Smp_049300.3 0 1.86 -0.79 -4.47 -2.75
Smp_171540.2 0 1.44 -2.06 -3.96 -2.73
Smp_202560.1 0 4.87 -1.17 -2.65 -2.65
Smp_201230.1 0 1.72 -0.34 -3.72 -2.51
Smp_205220.1 0 2.68 1.94 -1.09 -2.07
Smp_202230.1 0 5.69 2.03 -1.93 -1.93
Smp_164180.1 0 3.02 1.05 -0.21 -1.81
Smp_200600.1 0 3.98 2.91 -2.23 -1.39
Smp_202160.1 0 2.79 -1.17 -2.66 -1.06
Smp_179390.1 0 2.87 -2.17 -1.54 -0.29
Smp_145100.1 0 5.41 1.47 0.00 0.00
Smp_143450.1 0 6.96 3.27 0.00 0.00
Smp_136240.5 0 8.50 0.00 0.00 0.00
Smp_203550.1 0 6.10 1.47 2.03 0.00
Smp_048060.1 0 5.72 0.00 0.00 0.00
Smp_204950.1 0 5.97 5.20 0.00 0.00
Smp_177380.1 0 7.51 1.65 4.19 0.67
Smp_204190.1 0 3.21 -3.16 -0.75 1.19
Smp_204650.1 0 7.45 2.61 0.00 2.29
Smp_201000.1 0 6.84 0.00 2.13 2.38
Smp_139700.1 0 6.89 4.15 2.03 5.39

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_000250.1 SmLINC05178-IBu 0.84 7.61e-05 1.10e-03
Smp_005080.1 SmLINC05178-IBu 0.82 1.00e-04 1.70e-03
Smp_008390.1 SmLINC05178-IBu 0.83 1.00e-04 1.50e-03
Smp_015190.1 SmLINC05178-IBu 0.86 2.81e-05 5.00e-04
Smp_017080.3 SmLINC05178-IBu 0.89 7.30e-06 2.00e-04
Smp_019000.1 SmLINC05178-IBu 0.84 7.29e-05 1.10e-03
Smp_021460.1 SmLINC05178-IBu 0.92 9.75e-07 5.04e-05
Smp_033930.1 SmLINC05178-IBu 0.89 4.96e-06 1.00e-04
Smp_035020.1 SmLINC05178-IBu 0.87 1.68e-05 3.00e-04
Smp_048060.1 SmLINC05178-IBu 0.88 9.89e-06 2.00e-04
Smp_049250.1 SmLINC05178-IBu 0.84 6.68e-05 1.00e-03
Smp_049300.3 SmLINC05178-IBu 0.93 3.96e-07 2.67e-05
Smp_049300.4 SmLINC05178-IBu 0.85 5.74e-05 9.00e-04
Smp_060760.1 SmLINC05178-IBu 0.88 1.20e-05 3.00e-04
Smp_062080.1 SmLINC05178-IBu 0.81 2.00e-04 2.40e-03
Smp_069220.1 SmLINC05178-IBu 0.92 7.91e-07 4.34e-05
Smp_072320.1 SmLINC05178-IBu 0.80 2.00e-04 3.10e-03
Smp_079280.1 SmLINC05178-IBu 0.84 8.27e-05 1.20e-03
Smp_079960.1 SmLINC05178-IBu 0.91 2.09e-06 8.68e-05
Smp_080920.1 SmLINC05178-IBu 0.90 3.69e-06 1.00e-04
Smp_080920.2 SmLINC05178-IBu 0.87 2.47e-05 5.00e-04
Smp_084210.1 SmLINC05178-IBu 0.80 2.00e-04 2.80e-03
Smp_089860.1 SmLINC05178-IBu 0.87 1.98e-05 4.00e-04
Smp_094680.1 SmLINC05178-IBu 0.82 1.00e-04 2.00e-03
Smp_097020.1 SmLINC05178-IBu 0.88 1.04e-05 2.00e-04
Smp_103140.1 SmLINC05178-IBu 0.98 5.63e-12 1.74e-08
Smp_106930.1 SmLINC05178-IBu 0.96 1.36e-08 2.63e-06
Smp_107590.1 SmLINC05178-IBu 0.85 4.96e-05 8.00e-04
Smp_111340.6 SmLINC05178-IBu 0.86 3.90e-05 7.00e-04
Smp_113310.1 SmLINC05178-IBu 0.89 7.60e-06 2.00e-04
Smp_124140.1 SmLINC05178-IBu 0.86 3.70e-05 6.00e-04
Smp_125070.1 SmLINC05178-IBu 0.80 2.00e-04 2.80e-03
Smp_136240.5 SmLINC05178-IBu 0.80 2.00e-04 2.90e-03
Smp_139700.1 SmLINC05178-IBu 0.89 7.13e-06 2.00e-04
Smp_142460.1 SmLINC05178-IBu 0.83 1.00e-04 1.40e-03
Smp_143450.1 SmLINC05178-IBu 0.96 5.53e-09 1.44e-06
Smp_145100.1 SmLINC05178-IBu 0.93 3.73e-07 2.56e-05
Smp_147530.1 SmLINC05178-IBu 0.82 1.00e-04 1.90e-03
Smp_148840.1 SmLINC05178-IBu 0.96 5.86e-09 1.49e-06
Smp_149750.1 SmLINC05178-IBu 0.88 9.31e-06 2.00e-04
Smp_159350.1 SmLINC05178-IBu 0.83 1.00e-04 1.40e-03
Smp_159610.1 SmLINC05178-IBu 0.89 8.31e-06 2.00e-04
Smp_164180.1 SmLINC05178-IBu 0.84 7.46e-05 1.10e-03
Smp_164270.1 SmLINC05178-IBu 0.85 4.27e-05 7.00e-04
Smp_171360.1 SmLINC05178-IBu 0.83 1.00e-04 1.40e-03
Smp_171540.2 SmLINC05178-IBu 0.87 2.46e-05 5.00e-04
Smp_176230.2 SmLINC05178-IBu 0.84 6.77e-05 1.00e-03
Smp_177380.1 SmLINC05178-IBu 0.81 2.00e-04 2.60e-03
Smp_179390.1 SmLINC05178-IBu 0.85 4.26e-05 7.00e-04
Smp_179670.1 SmLINC05178-IBu 0.90 4.84e-06 1.00e-04
Smp_182940.1 SmLINC05178-IBu 0.80 3.00e-04 3.20e-03
Smp_184710.1 SmLINC05178-IBu 0.80 2.00e-04 2.80e-03
Smp_185830.1 SmLINC05178-IBu 0.83 1.00e-04 1.50e-03
Smp_186020.1 SmLINC05178-IBu 0.84 6.52e-05 1.00e-03
Smp_187010.1 SmLINC05178-IBu 0.86 3.18e-05 6.00e-04
Smp_188780.1 SmLINC05178-IBu 0.80 2.00e-04 3.00e-03
Smp_189120.1 SmLINC05178-IBu 0.80 2.00e-04 2.90e-03
Smp_193700.1 SmLINC05178-IBu 0.86 2.83e-05 5.00e-04
Smp_193990.1 SmLINC05178-IBu 0.82 1.00e-04 2.10e-03
Smp_196680.1 SmLINC05178-IBu 0.96 3.10e-09 9.84e-07
Smp_200010.1 SmLINC05178-IBu 0.82 1.00e-04 2.00e-03
Smp_200480.1 SmLINC05178-IBu 0.87 1.59e-05 3.00e-04
Smp_200600.1 SmLINC05178-IBu 0.87 2.24e-05 4.00e-04
Smp_200770.1 SmLINC05178-IBu 0.89 5.27e-06 1.00e-04
Smp_201000.1 SmLINC05178-IBu 0.93 3.57e-07 2.48e-05
Smp_201230.1 SmLINC05178-IBu 0.91 2.33e-06 9.38e-05
Smp_201790.1 SmLINC05178-IBu 0.83 1.00e-04 1.60e-03
Smp_202030.1 SmLINC05178-IBu 0.81 2.00e-04 2.60e-03
Smp_202160.1 SmLINC05178-IBu 0.82 1.00e-04 1.90e-03
Smp_202230.1 SmLINC05178-IBu 0.91 1.66e-06 7.37e-05
Smp_202560.1 SmLINC05178-IBu 0.94 1.34e-07 1.26e-05
Smp_202670.1 SmLINC05178-IBu 0.80 3.00e-04 3.20e-03
Smp_202720.1 SmLINC05178-IBu 0.97 7.93e-10 4.06e-07
Smp_202780.1 SmLINC05178-IBu 0.83 1.00e-04 1.60e-03
Smp_202990.1 SmLINC05178-IBu 0.84 6.18e-05 9.00e-04
Smp_203470.1 SmLINC05178-IBu 0.89 7.25e-06 2.00e-04
Smp_203550.1 SmLINC05178-IBu 0.92 5.42e-07 3.33e-05
Smp_204190.1 SmLINC05178-IBu 0.87 1.73e-05 3.00e-04
Smp_204460.1 SmLINC05178-IBu 0.81 1.00e-04 2.20e-03
Smp_204650.1 SmLINC05178-IBu 0.92 1.18e-06 5.77e-05
Smp_204950.1 SmLINC05178-IBu 0.81 2.00e-04 2.40e-03
Smp_205000.1 SmLINC05178-IBu 0.86 3.29e-05 6.00e-04
Smp_205120.1 SmLINC05178-IBu 0.81 2.00e-04 2.40e-03
Smp_205220.1 SmLINC05178-IBu 0.94 1.00e-07 1.03e-05