Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC05095-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:30754639-30756729 - Strand: -


Fig. S5 for SmLINC05095-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_169190.1 0 -3.08 -5.99 -19.20 -16.89
Smp_134410.1 0 -2.22 -3.88 -6.81 -12.78
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_032980.1 0 -3.49 -10.60 -12.19 -12.01
Smp_206150.1 0 -1.95 -4.12 -11.47 -11.47
Smp_133770.1 0 -4.18 -7.68 -11.38 -11.45
Smp_153240.1 0 -4.59 -8.67 -11.23 -11.04
SmLINC05095-IBu 0 -2.89 -9.14 -9.14 -9.14
Smp_018880.1 0 -2.71 -8.49 -10.03 -6.16
Smp_065580.1 0 -2.41 -12.61 -6.08 -5.45

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_018880.1 SmLINC05095-IBu 0.91 1.27e-06 6.34e-05
Smp_032980.1 SmLINC05095-IBu 0.90 3.94e-06 1.00e-04
Smp_065580.1 SmLINC05095-IBu 0.92 6.78e-07 4.06e-05
Smp_102670.1 SmLINC05095-IBu 0.96 1.19e-08 2.56e-06
Smp_133770.1 SmLINC05095-IBu 0.92 6.63e-07 4.00e-05
Smp_134410.1 SmLINC05095-IBu 0.91 1.35e-06 6.61e-05
Smp_153240.1 SmLINC05095-IBu 0.91 1.32e-06 6.49e-05
Smp_169190.1 SmLINC05095-IBu 0.96 8.72e-09 2.08e-06
Smp_206150.1 SmLINC05095-IBu 0.90 3.37e-06 1.00e-04