Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC04965-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:25177161-25181671 - Strand: +

Fig. S5 for SmLINC04965-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_176230.2 0 0.48 -0.91 -5.65 -11.30
Smp_033050.2 0 0.00 -0.84 -2.77 -10.32
SmLINC04965-IBu 0 0.16 -1.01 -3.32 -4.58

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_033050.2 SmLINC04965-IBu 0.90 4.23e-06 1.00e-04
Smp_176230.2 SmLINC04965-IBu 0.96 5.93e-09 1.61e-06