Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC04957-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:24544761-24554131 - Strand: -


Fig. 7A S3 for SmLINC04957-IBu with r ≥ 0.5 or r ≤ -0.5..

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC04957-IBu 0 -2.62 -5.9 -3.92 -7.44
Smp_079920.1 0 -2.43 -3.9 -3.20 -3.57

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_079920.1 SmLINC04957-IBu 0.93 2.56e-07 1.35e-05
Fig. 6A for SmLINC04957-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_169190.1 0 -3.08 -5.99 -19.20 -16.89
Smp_206200.1 0 -1.74 -3.03 -14.12 -16.70
Smp_205860.1 0 -1.49 -2.52 -10.82 -15.29
Smp_035090.2 0 -1.41 -2.69 -14.78 -14.86
Smp_043670.2 0 -2.66 -2.86 -6.28 -13.62
Smp_034940.3 0 -1.53 -6.25 -9.66 -13.38
Smp_134410.1 0 -2.22 -3.88 -6.81 -12.78
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_055770.1 0 -5.16 -5.96 -12.28 -12.28
Smp_079970.1 0 -3.36 -6.77 -9.16 -12.28
Smp_032980.1 0 -3.49 -10.60 -12.19 -12.01
Smp_173050.1 0 -1.57 -2.58 -4.02 -11.56
Smp_152780.1 0 -4.06 -8.92 -8.72 -11.55
Smp_186130.1 0 -2.11 -1.47 -10.40 -10.85
Smp_182890.1 0 -1.33 -1.67 -9.07 -10.72
Smp_167680.1 0 -1.95 -2.65 -4.96 -10.61
Smp_071380.2 0 -3.62 -7.62 -10.38 -10.26
Smp_109240.1 0 -1.29 -3.52 -6.30 -10.11
Smp_096020.1 0 -1.77 -8.42 -9.21 -10.05
Smp_187350.1 0 -1.35 -2.38 -8.77 -9.63
Smp_014400.5 0 -2.15 -4.06 -6.32 -9.42
Smp_178630.1 0 -1.78 -5.50 -9.26 -9.26
Smp_178620.1 0 -1.14 -2.86 -9.00 -9.00
Smp_200320.1 0 -2.27 -7.31 -5.59 -8.81
Smp_125090.1 0 -1.49 -2.90 -8.82 -8.63
Smp_195140.1 0 -1.78 -5.21 -6.28 -8.26
Smp_009310.4 0 -2.57 -4.50 -7.03 -8.00
Smp_194770.1 0 -2.35 -7.85 -7.77 -7.92
Smp_135250.1 0 -4.50 -7.60 -5.52 -7.87
Smp_198950.1 0 -0.98 -2.10 -5.57 -7.76
Smp_195160.1 0 -1.78 -3.62 -7.03 -7.47
SmLINC04957-IBu 0 -2.62 -5.90 -3.92 -7.44
Smp_057790.1 0 -3.82 -7.29 -4.86 -7.43
Smp_099680.1 0 -3.17 -4.14 -4.93 -7.18
Smp_179640.1 0 -2.62 -9.51 -6.28 -7.06
Smp_183420.1 0 -2.62 -9.51 -6.28 -7.06
Smp_145340.1 0 -2.62 -9.51 -6.28 -7.06
Smp_196050.1 0 -3.12 -5.35 -6.02 -6.99
Smp_074200.1 0 -1.40 -4.07 -6.05 -6.98
Smp_099670.1 0 -3.51 -4.19 -5.26 -6.78
Smp_014400.3 0 -1.41 -3.60 -7.89 -6.71
Smp_038530.1 0 -2.20 -4.62 -4.98 -6.68
Smp_136240.9 0 -3.09 -3.16 -4.37 -6.52
Smp_030500.1 0 -2.77 -6.42 -6.74 -6.44
Smp_018880.1 0 -2.71 -8.49 -10.03 -6.16
Smp_093930.1 0 -2.05 -2.86 -4.42 -6.13
Smp_042160.2 0 -1.15 -4.96 -5.11 -6.09
Smp_057060.1 0 -3.71 -5.93 -6.06 -6.08
Smp_178530.1 0 -1.33 -2.48 -5.11 -6.02
Smp_079220.1 0 -2.48 -4.55 -6.52 -5.99
Smp_157310.1 0 -3.02 -6.78 -4.07 -5.91
Smp_214150.1 0 -3.99 -7.32 -3.18 -5.90
Smp_096830.1 0 -1.12 -4.58 -7.61 -5.89
Smp_206130.1 0 -1.65 -4.00 -5.51 -5.79
Smp_083720.1 0 -2.37 -5.50 -6.31 -5.77
Smp_010000.1 0 -1.51 -3.27 -4.59 -5.75
Smp_159600.1 0 -1.24 -3.76 -4.15 -5.60
Smp_111320.1 0 -0.97 -2.64 -4.04 -5.54
Smp_174560.1 0 -1.74 -2.28 -5.34 -5.48
Smp_088610.1 0 -1.02 -3.23 -3.96 -5.44
Smp_061870.1 0 -2.53 -4.47 -5.29 -5.38
Smp_000330.1 0 -3.46 -5.35 -5.35 -5.35
Smp_016730.1 0 -3.42 -4.55 -5.13 -5.31
Smp_092320.1 0 -1.82 -3.08 -5.42 -5.28
Smp_005880.1 0 -1.71 -5.17 -4.43 -5.19
Smp_175190.1 0 -3.40 -5.32 -6.00 -5.17
Smp_205550.1 0 -1.80 -2.45 -3.88 -5.14
Smp_204770.1 0 -2.64 -6.46 -5.44 -5.13
Smp_020550.1 0 -3.71 -4.02 -4.24 -5.10
Smp_087250.1 0 -2.06 -5.90 -3.94 -5.02
Smp_166950.1 0 -1.86 -2.33 -5.56 -4.94
Smp_034550.1 0 -2.91 -5.29 -2.60 -4.93
Smp_153600.1 0 -2.66 -5.24 -5.88 -4.89
Smp_137520.1 0 -2.84 -5.66 -3.12 -4.79
Smp_133310.1 0 -1.74 -4.20 -4.35 -4.73
Smp_062720.2 0 -4.51 -3.77 -3.48 -4.71
Smp_152260.1 0 -3.17 -4.39 -4.03 -4.71
Smp_213910.1 0 -1.33 -3.68 -2.65 -4.53
Smp_125440.1 0 -4.16 -3.48 -3.28 -4.46
Smp_184750.1 0 -1.93 -3.13 -4.74 -4.46
Smp_197110.1 0 -1.94 -2.50 -4.24 -4.44
Smp_002510.1 0 -3.00 -2.99 -4.71 -4.29
Smp_033400.1 0 -2.69 -7.71 -5.07 -4.27
Smp_019750.2 0 -2.70 -5.17 -4.10 -4.19
Smp_050830.1 0 -1.69 -2.62 -4.49 -4.19
Smp_063090.1 0 -2.16 -4.16 -3.57 -3.93
Smp_021730.1 0 -2.52 -3.78 -4.00 -3.90
Smp_159190.1 0 -3.70 -3.60 -3.46 -3.88
Smp_009650.1 0 -2.22 -4.12 -4.36 -3.86
Smp_071390.1 0 -3.12 -4.67 -2.84 -3.82
Smp_076010.1 0 -2.03 -5.17 -3.81 -3.82
Smp_124340.1 0 -2.62 -4.99 -7.42 -3.75
Smp_036250.1 0 -3.24 -3.82 -4.15 -3.72
Smp_155890.1 0 -3.01 -4.45 -2.70 -3.71
Smp_129610.1 0 -3.45 -4.74 -3.50 -3.64
Smp_079920.1 0 -2.43 -3.90 -3.20 -3.57
Smp_038100.1 0 -2.11 -3.55 -4.08 -3.42
Smp_140270.1 0 -2.83 -3.04 -4.31 -3.33
Smp_035270.2 0 -2.51 -3.90 -3.56 -3.15
Smp_054470.1 0 -3.95 -5.79 -2.45 -3.05
Smp_099420.1 0 -2.79 -4.14 -4.04 -2.98
Smp_154370.1 0 -2.82 -7.17 -3.52 -2.90
Smp_112480.1 0 -3.87 -4.82 -3.33 -2.83
Smp_097490.1 0 -3.10 -5.15 -2.72 -1.99

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_000330.1 SmLINC04957-IBu 0.93 2.30e-07 1.82e-05
Smp_002510.1 SmLINC04957-IBu 0.92 1.11e-06 5.54e-05
Smp_005880.1 SmLINC04957-IBu 0.92 8.51e-07 4.57e-05
Smp_009310.4 SmLINC04957-IBu 0.86 3.41e-05 6.00e-04
Smp_009650.1 SmLINC04957-IBu 0.94 8.00e-08 8.80e-06
Smp_010000.1 SmLINC04957-IBu 0.92 8.74e-07 4.66e-05
Smp_014400.3 SmLINC04957-IBu 0.81 2.00e-04 2.40e-03
Smp_014400.5 SmLINC04957-IBu 0.81 1.00e-04 2.20e-03
Smp_016730.1 SmLINC04957-IBu 0.93 2.74e-07 2.06e-05
Smp_018880.1 SmLINC04957-IBu 0.82 1.00e-04 1.80e-03
Smp_019750.2 SmLINC04957-IBu 0.84 8.20e-05 1.20e-03
Smp_020550.1 SmLINC04957-IBu 0.91 1.38e-06 6.48e-05
Smp_021730.1 SmLINC04957-IBu 0.82 1.00e-04 1.90e-03
Smp_030500.1 SmLINC04957-IBu 0.90 3.14e-06 1.00e-04
Smp_032980.1 SmLINC04957-IBu 0.98 1.42e-11 3.10e-08
Smp_033400.1 SmLINC04957-IBu 0.96 6.62e-09 1.62e-06
Smp_034550.1 SmLINC04957-IBu 0.90 3.78e-06 1.00e-04
Smp_034940.3 SmLINC04957-IBu 0.88 1.10e-05 2.00e-04
Smp_035090.2 SmLINC04957-IBu 0.83 1.00e-04 1.50e-03
Smp_035270.2 SmLINC04957-IBu 0.96 1.40e-08 2.69e-06
Smp_036250.1 SmLINC04957-IBu 0.91 1.79e-06 7.78e-05
Smp_038100.1 SmLINC04957-IBu 0.91 2.00e-06 8.41e-05
Smp_038530.1 SmLINC04957-IBu 0.91 1.76e-06 7.69e-05
Smp_042160.2 SmLINC04957-IBu 0.82 1.00e-04 1.70e-03
Smp_043670.2 SmLINC04957-IBu 0.85 4.94e-05 8.00e-04
Smp_050830.1 SmLINC04957-IBu 0.86 2.63e-05 5.00e-04
Smp_054470.1 SmLINC04957-IBu 0.82 1.00e-04 1.80e-03
Smp_055770.1 SmLINC04957-IBu 0.90 3.88e-06 1.00e-04
Smp_057060.1 SmLINC04957-IBu 0.83 1.00e-04 1.40e-03
Smp_057790.1 SmLINC04957-IBu 0.87 2.34e-05 4.00e-04
Smp_061870.1 SmLINC04957-IBu 0.87 2.10e-05 4.00e-04
Smp_062720.2 SmLINC04957-IBu 0.85 5.09e-05 8.00e-04
Smp_063090.1 SmLINC04957-IBu 0.94 1.23e-07 1.18e-05
Smp_071380.2 SmLINC04957-IBu 0.82 1.00e-04 2.00e-03
Smp_071390.1 SmLINC04957-IBu 0.92 7.69e-07 4.26e-05
Smp_074200.1 SmLINC04957-IBu 0.86 3.65e-05 6.00e-04
Smp_076010.1 SmLINC04957-IBu 0.95 1.97e-08 3.38e-06
Smp_079220.1 SmLINC04957-IBu 0.88 1.38e-05 3.00e-04
Smp_079920.1 SmLINC04957-IBu 0.93 2.56e-07 1.97e-05
Smp_079970.1 SmLINC04957-IBu 0.93 3.19e-07 2.30e-05
Smp_083720.1 SmLINC04957-IBu 0.93 2.30e-07 1.82e-05
Smp_087250.1 SmLINC04957-IBu 0.89 6.00e-06 1.00e-04
Smp_088610.1 SmLINC04957-IBu 0.86 2.51e-05 5.00e-04
Smp_092320.1 SmLINC04957-IBu 0.89 5.97e-06 1.00e-04
Smp_093930.1 SmLINC04957-IBu 0.82 1.00e-04 1.80e-03
Smp_096020.1 SmLINC04957-IBu 0.80 3.00e-04 3.40e-03
Smp_096830.1 SmLINC04957-IBu 0.81 1.00e-04 2.30e-03
Smp_097490.1 SmLINC04957-IBu 0.82 1.00e-04 1.90e-03
Smp_099420.1 SmLINC04957-IBu 0.84 8.28e-05 1.20e-03
Smp_099670.1 SmLINC04957-IBu 0.91 2.21e-06 9.03e-05
Smp_099680.1 SmLINC04957-IBu 0.88 1.06e-05 2.00e-04
Smp_102670.1 SmLINC04957-IBu 0.83 9.92e-05 1.40e-03
Smp_109240.1 SmLINC04957-IBu 0.86 3.18e-05 6.00e-04
Smp_111320.1 SmLINC04957-IBu 0.81 2.00e-04 2.60e-03
Smp_112480.1 SmLINC04957-IBu 0.89 7.53e-06 2.00e-04
Smp_124340.1 SmLINC04957-IBu 0.89 5.22e-06 1.00e-04
Smp_125090.1 SmLINC04957-IBu 0.81 2.00e-04 2.40e-03
Smp_125440.1 SmLINC04957-IBu 0.80 2.00e-04 2.70e-03
Smp_129610.1 SmLINC04957-IBu 0.93 4.56e-07 2.95e-05
Smp_133310.1 SmLINC04957-IBu 0.81 2.00e-04 2.40e-03
Smp_134410.1 SmLINC04957-IBu 0.89 7.36e-06 2.00e-04
Smp_135250.1 SmLINC04957-IBu 0.82 1.00e-04 1.90e-03
Smp_136240.9 SmLINC04957-IBu 0.88 1.20e-05 3.00e-04
Smp_137520.1 SmLINC04957-IBu 0.94 1.84e-07 1.56e-05
Smp_140270.1 SmLINC04957-IBu 0.89 5.56e-06 1.00e-04
Smp_145340.1 SmLINC04957-IBu 0.87 1.55e-05 3.00e-04
Smp_152260.1 SmLINC04957-IBu 0.88 1.05e-05 2.00e-04
Smp_152780.1 SmLINC04957-IBu 0.93 3.58e-07 2.49e-05
Smp_153600.1 SmLINC04957-IBu 0.95 2.53e-08 4.00e-06
Smp_154370.1 SmLINC04957-IBu 0.91 1.86e-06 8.00e-05
Smp_155890.1 SmLINC04957-IBu 0.88 1.34e-05 3.00e-04
Smp_157310.1 SmLINC04957-IBu 0.81 2.00e-04 2.40e-03
Smp_159190.1 SmLINC04957-IBu 0.85 5.32e-05 8.00e-04
Smp_159600.1 SmLINC04957-IBu 0.88 1.24e-05 3.00e-04
Smp_166950.1 SmLINC04957-IBu 0.82 1.00e-04 2.10e-03
Smp_167680.1 SmLINC04957-IBu 0.85 5.45e-05 9.00e-04
Smp_169190.1 SmLINC04957-IBu 0.87 2.32e-05 4.00e-04
Smp_173050.1 SmLINC04957-IBu 0.82 1.00e-04 1.90e-03
Smp_174560.1 SmLINC04957-IBu 0.89 8.10e-06 2.00e-04
Smp_175190.1 SmLINC04957-IBu 0.95 1.59e-08 2.92e-06
Smp_178530.1 SmLINC04957-IBu 0.89 4.93e-06 1.00e-04
Smp_178620.1 SmLINC04957-IBu 0.82 1.00e-04 1.70e-03
Smp_178630.1 SmLINC04957-IBu 0.85 5.83e-05 9.00e-04
Smp_179640.1 SmLINC04957-IBu 0.87 1.55e-05 3.00e-04
Smp_182890.1 SmLINC04957-IBu 0.82 1.00e-04 1.70e-03
Smp_183420.1 SmLINC04957-IBu 0.87 1.55e-05 3.00e-04
Smp_184750.1 SmLINC04957-IBu 0.84 6.58e-05 1.00e-03
Smp_186130.1 SmLINC04957-IBu 0.85 5.63e-05 9.00e-04
Smp_187350.1 SmLINC04957-IBu 0.85 5.81e-05 9.00e-04
Smp_194770.1 SmLINC04957-IBu 0.93 2.34e-07 1.85e-05
Smp_195140.1 SmLINC04957-IBu 0.95 2.30e-08 3.75e-06
Smp_195160.1 SmLINC04957-IBu 0.85 4.03e-05 7.00e-04
Smp_196050.1 SmLINC04957-IBu 0.93 3.22e-07 2.31e-05
Smp_197110.1 SmLINC04957-IBu 0.90 3.19e-06 1.00e-04
Smp_198950.1 SmLINC04957-IBu 0.85 3.97e-05 7.00e-04
Smp_200320.1 SmLINC04957-IBu 0.88 1.37e-05 3.00e-04
Smp_204770.1 SmLINC04957-IBu 0.95 3.47e-08 4.97e-06
Smp_205550.1 SmLINC04957-IBu 0.83 1.00e-04 1.40e-03
Smp_205860.1 SmLINC04957-IBu 0.80 2.00e-04 2.90e-03
Smp_206130.1 SmLINC04957-IBu 0.80 3.00e-04 3.30e-03
Smp_206200.1 SmLINC04957-IBu 0.92 6.94e-07 3.96e-05
Smp_213910.1 SmLINC04957-IBu 0.90 4.83e-06 1.00e-04
Smp_214150.1 SmLINC04957-IBu 0.84 6.75e-05 1.00e-03
Fig. S5 for SmLINC04957-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_206200.1 0 -1.74 -3.03 -14.12 -16.70
Smp_055770.1 0 -5.16 -5.96 -12.28 -12.28
Smp_079970.1 0 -3.36 -6.77 -9.16 -12.28
Smp_032980.1 0 -3.49 -10.60 -12.19 -12.01
Smp_152780.1 0 -4.06 -8.92 -8.72 -11.55
SmLINC04957-IBu 0 -2.62 -5.90 -3.92 -7.44

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_032980.1 SmLINC04957-IBu 0.98 1.42e-11 3.42e-08
Smp_055770.1 SmLINC04957-IBu 0.90 3.88e-06 1.00e-04
Smp_079970.1 SmLINC04957-IBu 0.93 3.19e-07 2.41e-05
Smp_152780.1 SmLINC04957-IBu 0.93 3.58e-07 2.60e-05
Smp_206200.1 SmLINC04957-IBu 0.92 6.94e-07 4.12e-05