Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC04725-IBu Data

Chromosome: Chr ZW - Coordinate: Chr ZW:13857477-13860872 - Strand: +


Fig. S5 for SmLINC04725-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC04725-IBu 0 5.17 4.46 7.70 7.91
Smp_031770.10 0 0.00 0.00 10.09 10.31
Smp_058660.1 0 1.16 3.97 10.53 10.53
Smp_145400.1 0 4.59 7.69 11.32 11.39
Smp_020760.2 0 9.23 8.40 12.26 12.26
Smp_083990.2 0 9.99 8.37 12.41 12.60

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_020760.2 SmLINC04725-IBu 0.91 1.76e-06 7.97e-05
Smp_031770.10 SmLINC04725-IBu 0.90 2.84e-06 1.00e-04
Smp_058660.1 SmLINC04725-IBu 0.90 2.76e-06 1.00e-04
Smp_083990.2 SmLINC04725-IBu 0.92 7.77e-07 4.47e-05
Smp_145400.1 SmLINC04725-IBu 0.92 8.19e-07 4.63e-05