Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC04382-IBu Data

Chromosome: Chr 7 - Coordinate: Chr 7:5723250-5730711 - Strand: +

Fig. S5 for SmLINC04382-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_185830.1 0 1.64 -1.15 -9.24 -11.35
Smp_204360.1 0 0.81 -0.39 -6.29 -10.08
SmLINC04382-IBu 0 1.04 -0.90 -2.40 -3.91

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_185830.1 SmLINC04382-IBu 0.92 5.80e-07 3.64e-05
Smp_204360.1 SmLINC04382-IBu 0.91 1.62e-06 7.50e-05