Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC04103-IBu Data

Chromosome: Chr 6 - Coordinate: Chr 6:9511941-9515496 - Strand: -


Fig. S5 for SmLINC04103-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_024140.1 0 0.15 -0.05 -5.68 -10.99
SmLINC04103-IBu 0 1.84 1.78 -2.37 -4.56
Smp_017650.1 0 9.51 10.68 -7.98 0.00

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_017650.1 SmLINC04103-IBu 0.91 1.69e-06 7.72e-05
Smp_024140.1 SmLINC04103-IBu 0.94 6.37e-08 7.96e-06