Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC04001-IBu Data

Chromosome: Chr 6 - Coordinate: Chr 6:4429773-4437825 - Strand: +


Fig. S5 for SmLINC04001-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_212510.1 0 -0.05 -0.36 -7.08 -10.79
Smp_168800.1 0 0.13 -0.51 -10.46 -10.46
SmLINC04001-IBu 0 0.59 0.46 -3.65 -5.58
Smp_038870.2 0 -10.39 -10.39 1.75 2.41

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_038870.2 SmLINC04001-IBu -0.90 3.43e-06 1.00e-04
Smp_168800.1 SmLINC04001-IBu 0.95 3.02e-08 4.80e-06
Smp_212510.1 SmLINC04001-IBu 0.90 2.55e-06 1.00e-04