Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC03964-IBu Data

Chromosome: Chr 6 - Coordinate: Chr 6:3069528-3077970 - Strand: +


Fig. S5 for SmLINC03964-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_184760.1 0 -0.25 -4.83 -11.75 -14.03
Smp_036270.4 0 -0.36 -2.80 -8.87 -13.92
SmLINC03964-IBu 0 -0.32 -2.57 -5.22 -5.79

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_036270.4 SmLINC03964-IBu 0.90 2.52e-06 1.00e-04
Smp_184760.1 SmLINC03964-IBu 0.92 8.33e-07 4.69e-05