Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC03769-IBu Data

Chromosome: Chr 5 - Coordinate: Chr 5:813427-814309 - Strand: +


Fig. 7A S3 for SmLINC03769-IBu with r ≥ 0.5 or r ≤ -0.5..

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC03769-IBu 0 -1.05 -2.94 -6.89 -9.10
Smp_060420.5 0 -1.67 -0.43 2.87 2.81

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_060420.5 SmLINC03769-IBu -0.63 1.10e-02 3.71e-02
Fig. 6A for SmLINC03769-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_206200.1 0 -1.74 -3.03 -14.12 -16.70
Smp_195070.1 0 -1.13 -9.73 -18.26 -16.31
Smp_205860.1 0 -1.49 -2.52 -10.82 -15.29
Smp_035090.2 0 -1.41 -2.69 -14.78 -14.86
Smp_036270.4 0 -0.36 -2.80 -8.87 -13.92
Smp_034940.3 0 -1.53 -6.25 -9.66 -13.38
Smp_192890.1 0 -1.10 -2.06 -12.83 -12.83
Smp_134410.1 0 -2.22 -3.88 -6.81 -12.78
Smp_051230.4 0 -1.10 -5.26 -12.47 -12.47
Smp_123000.1 0 0.49 -5.87 -12.08 -12.08
Smp_168080.2 0 -1.01 -12.06 -12.06 -12.06
Smp_182890.1 0 -1.33 -1.67 -9.07 -10.72
Smp_028990.3 0 -1.23 -2.49 -10.45 -10.45
Smp_090930.2 0 -0.51 -10.22 -10.22 -10.22
Smp_009320.1 0 -0.45 -10.12 -7.98 -10.12
Smp_109240.1 0 -1.29 -3.52 -6.30 -10.11
Smp_096020.1 0 -1.77 -8.42 -9.21 -10.05
Smp_188880.1 0 -0.67 -5.57 -9.86 -9.86
Smp_141630.1 0 -0.98 -2.37 -8.56 -9.70
Smp_187350.1 0 -1.35 -2.38 -8.77 -9.63
Smp_175890.1 0 -0.96 -2.50 -8.62 -9.58
Smp_205480.1 0 0.40 -2.39 -9.52 -9.52
Smp_046800.2 0 -1.01 -9.41 -9.41 -9.41
Smp_178630.1 0 -1.78 -5.50 -9.26 -9.26
SmLINC03769-IBu 0 -1.05 -2.94 -6.89 -9.10
Smp_002390.1 0 -0.32 -2.32 -7.83 -9.06
Smp_178620.1 0 -1.14 -2.86 -9.00 -9.00
Smp_051670.1 0 -0.76 -2.49 -6.26 -8.85
Smp_200320.1 0 -2.27 -7.31 -5.59 -8.81
Smp_143870.1 0 -0.39 -1.89 -6.40 -8.68
Smp_125090.1 0 -1.49 -2.90 -8.82 -8.63
Smp_179270.1 0 -1.07 -3.21 -9.00 -8.54
Smp_038730.10 0 -0.83 -3.49 -7.38 -8.47
Smp_161000.2 0 -1.02 -2.38 -7.73 -8.46
Smp_026160.2 0 0.93 -2.82 -7.30 -8.39
Smp_177520.1 0 -1.05 -1.72 -9.36 -8.37
Smp_191250.1 0 -0.43 -3.38 -7.55 -8.30
Smp_195140.1 0 -1.78 -5.21 -6.28 -8.26
Smp_194770.1 0 -2.35 -7.85 -7.77 -7.92
Smp_198950.1 0 -0.98 -2.10 -5.57 -7.76
Smp_128900.1 0 -0.43 -1.87 -6.58 -7.65
Smp_000380.1 0 -0.32 -2.14 -6.41 -7.59
Smp_195160.1 0 -1.78 -3.62 -7.03 -7.47
Smp_124150.1 0 -1.14 -4.97 -8.99 -7.14
Smp_196050.1 0 -3.12 -5.35 -6.02 -6.99
Smp_074200.1 0 -1.40 -4.07 -6.05 -6.98
Smp_196700.1 0 0.04 -8.78 -6.55 -6.98
Smp_162070.1 0 -0.47 -3.26 -7.76 -6.95
Smp_021060.1 0 -1.00 -2.60 -4.96 -6.87
Smp_018510.1 0 -0.95 -2.76 -7.05 -6.82
Smp_083340.1 0 -1.27 -1.69 -7.43 -6.68
Smp_182910.1 0 -1.24 -2.03 -6.37 -6.64
Smp_046930.1 0 -0.70 -2.23 -5.64 -6.64
Smp_199470.1 0 -0.59 -3.42 -6.26 -6.59
Smp_111340.1 0 -0.73 -0.50 -5.92 -6.46
Smp_165300.1 0 -0.91 -2.66 -11.47 -6.39
Smp_114220.1 0 -0.84 -2.09 -5.04 -6.34
Smp_203080.1 0 -0.76 -1.73 -8.70 -6.32
Smp_042160.2 0 -1.15 -4.96 -5.11 -6.09
Smp_178530.1 0 -1.33 -2.48 -5.11 -6.02
Smp_021330.1 0 0.03 -9.72 -5.60 -5.99
Smp_162370.1 0 -1.45 -4.56 -9.04 -5.93
Smp_004530.1 0 -0.23 -3.64 -5.83 -5.83
Smp_083720.1 0 -2.37 -5.50 -6.31 -5.77
Smp_010000.1 0 -1.51 -3.27 -4.59 -5.75
Smp_035310.1 0 -1.02 -2.20 -5.71 -5.71
Smp_159600.1 0 -1.24 -3.76 -4.15 -5.60
Smp_111320.1 0 -0.97 -2.64 -4.04 -5.54
Smp_154250.1 0 -0.91 -2.50 -5.33 -5.48
Smp_174560.1 0 -1.74 -2.28 -5.34 -5.48
Smp_088610.1 0 -1.02 -3.23 -3.96 -5.44
Smp_092320.1 0 -1.82 -3.08 -5.42 -5.28
Smp_212390.1 0 -0.91 -2.72 -3.77 -5.20
Smp_005880.1 0 -1.71 -5.17 -4.43 -5.19
Smp_204770.1 0 -2.64 -6.46 -5.44 -5.13
Smp_056940.1 0 -1.14 -2.37 -4.99 -4.95
Smp_129290.1 0 -0.51 -1.30 -6.92 -4.90
Smp_153600.1 0 -2.66 -5.24 -5.88 -4.89
Smp_131320.1 0 -0.70 -1.85 -4.63 -4.85
Smp_159900.1 0 -1.03 -2.21 -4.34 -4.82
Smp_186960.1 0 -1.00 -1.76 -4.20 -4.74
Smp_072110.1 0 -1.08 -3.84 -5.58 -4.73
Smp_009310.1 0 -0.72 -2.94 -4.33 -4.64
Smp_068780.2 0 -0.91 -1.96 -5.22 -4.63
Smp_097830.1 0 -0.72 -1.42 -3.72 -4.56
Smp_213910.1 0 -1.33 -3.68 -2.65 -4.53
Smp_213890.1 0 -1.00 -1.46 -4.08 -4.51
Smp_080920.3 0 -0.58 -3.50 -2.71 -4.51
Smp_125140.1 0 -0.33 -4.66 -7.65 -4.46
Smp_120920.2 0 -0.10 -2.98 -3.87 -4.44
Smp_119260.1 0 0.00 -1.60 -4.13 -4.36
Smp_050830.1 0 -1.69 -2.62 -4.49 -4.19
Smp_051230.3 0 -1.49 -4.66 -6.27 -4.15
Smp_136240.3 0 0.29 -2.67 -3.72 -4.15
Smp_082430.1 0 0.56 -9.20 -5.69 -4.14
Smp_199850.1 0 -0.54 -1.71 -4.55 -4.12
Smp_157450.1 0 -1.07 -2.97 -4.27 -4.05
Smp_194830.1 0 -0.36 -5.36 -4.51 -3.97
Smp_212100.1 0 -0.28 -1.09 -4.30 -3.94
Smp_178400.1 0 -0.69 -3.92 -8.55 -3.91
Smp_009650.1 0 -2.22 -4.12 -4.36 -3.86
Smp_076010.1 0 -2.03 -5.17 -3.81 -3.82
Smp_139790.1 0 -0.75 -6.56 -6.76 -3.63
Smp_185080.1 0 -0.58 -3.13 -5.88 -3.60
Smp_038100.1 0 -2.11 -3.55 -4.08 -3.42
Smp_082240.1 0 -0.22 -3.45 -3.39 -3.32
Smp_081790.1 0 0.27 0.87 3.44 3.91
Smp_200440.1 0 1.00 0.69 3.32 4.08
Smp_156460.1 0 0.33 1.81 3.22 4.15
Smp_104000.1 0 0.62 1.49 3.28 4.39
Smp_071050.1 0 1.37 1.31 3.40 4.43
Smp_214020.1 0 1.35 2.40 4.26 4.68
Smp_014260.1 0 2.10 2.61 4.63 5.12
Smp_180920.1 0 2.38 4.29 4.89 5.30
Smp_126470.1 0 1.38 2.58 4.77 5.50
Smp_157390.1 0 3.34 4.15 5.22 5.62
Smp_167900.1 0 2.31 3.06 5.33 6.34
Smp_202690.1 0 2.99 3.08 5.69 6.36
Smp_063060.1 0 4.43 5.74 6.88 7.39
Smp_160000.2 0 6.42 8.33 8.49 8.70
Smp_157140.1 0 9.07 10.07 10.84 11.76

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_000380.1 SmLINC03769-IBu 0.85 4.21e-05 7.00e-04
Smp_002390.1 SmLINC03769-IBu 0.90 3.40e-06 1.00e-04
Smp_004530.1 SmLINC03769-IBu 0.85 4.77e-05 8.00e-04
Smp_005880.1 SmLINC03769-IBu 0.85 4.45e-05 7.00e-04
Smp_009310.1 SmLINC03769-IBu 0.81 2.00e-04 2.60e-03
Smp_009320.1 SmLINC03769-IBu 0.91 1.98e-06 8.34e-05
Smp_009650.1 SmLINC03769-IBu 0.84 7.33e-05 1.10e-03
Smp_010000.1 SmLINC03769-IBu 0.89 6.87e-06 2.00e-04
Smp_014260.1 SmLINC03769-IBu -0.80 3.00e-04 3.30e-03
Smp_018510.1 SmLINC03769-IBu 0.91 1.70e-06 7.48e-05
Smp_021060.1 SmLINC03769-IBu 0.87 1.67e-05 3.00e-04
Smp_021330.1 SmLINC03769-IBu 0.88 1.48e-05 3.00e-04
Smp_026160.2 SmLINC03769-IBu 0.81 2.00e-04 2.50e-03
Smp_028990.3 SmLINC03769-IBu 0.85 5.19e-05 8.00e-04
Smp_034940.3 SmLINC03769-IBu 0.91 1.77e-06 7.72e-05
Smp_035090.2 SmLINC03769-IBu 0.87 2.04e-05 4.00e-04
Smp_035310.1 SmLINC03769-IBu 0.85 4.45e-05 7.00e-04
Smp_036270.4 SmLINC03769-IBu 0.84 7.89e-05 1.10e-03
Smp_038100.1 SmLINC03769-IBu 0.81 1.00e-04 2.30e-03
Smp_038730.10 SmLINC03769-IBu 0.87 1.61e-05 3.00e-04
Smp_042160.2 SmLINC03769-IBu 0.89 7.37e-06 2.00e-04
Smp_046800.2 SmLINC03769-IBu 0.93 3.33e-07 2.37e-05
Smp_046930.1 SmLINC03769-IBu 0.90 4.83e-06 1.00e-04
Smp_050830.1 SmLINC03769-IBu 0.80 3.00e-04 3.30e-03
Smp_051230.3 SmLINC03769-IBu 0.84 6.59e-05 1.00e-03
Smp_051230.4 SmLINC03769-IBu 0.85 5.72e-05 9.00e-04
Smp_051670.1 SmLINC03769-IBu 0.80 2.00e-04 3.10e-03
Smp_056940.1 SmLINC03769-IBu 0.80 2.00e-04 2.90e-03
Smp_063060.1 SmLINC03769-IBu -0.80 2.00e-04 2.70e-03
Smp_068780.2 SmLINC03769-IBu 0.84 8.05e-05 1.20e-03
Smp_071050.1 SmLINC03769-IBu -0.84 7.15e-05 1.10e-03
Smp_072110.1 SmLINC03769-IBu 0.81 1.00e-04 2.30e-03
Smp_074200.1 SmLINC03769-IBu 0.95 5.72e-08 6.99e-06
Smp_076010.1 SmLINC03769-IBu 0.84 8.63e-05 1.20e-03
Smp_080920.3 SmLINC03769-IBu 0.86 3.53e-05 6.00e-04
Smp_081790.1 SmLINC03769-IBu -0.81 2.00e-04 2.30e-03
Smp_082240.1 SmLINC03769-IBu 0.86 2.57e-05 5.00e-04
Smp_082430.1 SmLINC03769-IBu 0.83 1.00e-04 1.60e-03
Smp_083340.1 SmLINC03769-IBu 0.84 8.00e-05 1.20e-03
Smp_083720.1 SmLINC03769-IBu 0.81 2.00e-04 2.50e-03
Smp_088610.1 SmLINC03769-IBu 0.96 4.87e-09 1.32e-06
Smp_090930.2 SmLINC03769-IBu 0.83 9.23e-05 1.30e-03
Smp_092320.1 SmLINC03769-IBu 0.82 1.00e-04 1.70e-03
Smp_096020.1 SmLINC03769-IBu 0.81 2.00e-04 2.70e-03
Smp_097830.1 SmLINC03769-IBu 0.85 5.36e-05 8.00e-04
Smp_104000.1 SmLINC03769-IBu -0.80 3.00e-04 3.20e-03
Smp_109240.1 SmLINC03769-IBu 0.88 1.17e-05 2.00e-04
Smp_111320.1 SmLINC03769-IBu 0.95 4.15e-08 5.62e-06
Smp_111340.1 SmLINC03769-IBu 0.80 2.00e-04 2.90e-03
Smp_114220.1 SmLINC03769-IBu 0.94 8.23e-08 8.97e-06
Smp_119260.1 SmLINC03769-IBu 0.83 1.00e-04 1.40e-03
Smp_120920.2 SmLINC03769-IBu 0.84 6.56e-05 1.00e-03
Smp_123000.1 SmLINC03769-IBu 0.82 1.00e-04 1.90e-03
Smp_124150.1 SmLINC03769-IBu 0.86 2.90e-05 5.00e-04
Smp_125090.1 SmLINC03769-IBu 0.89 5.81e-06 1.00e-04
Smp_125140.1 SmLINC03769-IBu 0.87 1.85e-05 4.00e-04
Smp_126470.1 SmLINC03769-IBu -0.83 1.00e-04 1.50e-03
Smp_128900.1 SmLINC03769-IBu 0.80 3.00e-04 3.30e-03
Smp_129290.1 SmLINC03769-IBu 0.89 8.68e-06 2.00e-04
Smp_131320.1 SmLINC03769-IBu 0.80 2.00e-04 2.90e-03
Smp_134410.1 SmLINC03769-IBu 0.81 1.00e-04 2.30e-03
Smp_136240.3 SmLINC03769-IBu 0.86 3.85e-05 7.00e-04
Smp_139790.1 SmLINC03769-IBu 0.91 2.08e-06 8.64e-05
Smp_141630.1 SmLINC03769-IBu 0.90 3.43e-06 1.00e-04
Smp_143870.1 SmLINC03769-IBu 0.80 3.00e-04 3.30e-03
Smp_153600.1 SmLINC03769-IBu 0.80 2.00e-04 3.00e-03
Smp_154250.1 SmLINC03769-IBu 0.82 1.00e-04 2.00e-03
Smp_156460.1 SmLINC03769-IBu -0.81 2.00e-04 2.50e-03
Smp_157140.1 SmLINC03769-IBu -0.82 1.00e-04 1.90e-03
Smp_157390.1 SmLINC03769-IBu -0.82 1.00e-04 1.70e-03
Smp_157450.1 SmLINC03769-IBu 0.88 1.36e-05 3.00e-04
Smp_159600.1 SmLINC03769-IBu 0.90 4.42e-06 1.00e-04
Smp_159900.1 SmLINC03769-IBu 0.82 1.00e-04 2.10e-03
Smp_160000.2 SmLINC03769-IBu -0.80 3.00e-04 3.30e-03
Smp_161000.2 SmLINC03769-IBu 0.89 8.60e-06 2.00e-04
Smp_162070.1 SmLINC03769-IBu 0.89 6.88e-06 2.00e-04
Smp_162370.1 SmLINC03769-IBu 0.87 1.64e-05 3.00e-04
Smp_165300.1 SmLINC03769-IBu 0.86 3.81e-05 7.00e-04
Smp_167900.1 SmLINC03769-IBu -0.81 1.00e-04 2.20e-03
Smp_168080.2 SmLINC03769-IBu 0.81 1.00e-04 2.20e-03
Smp_174560.1 SmLINC03769-IBu 0.83 8.94e-05 1.30e-03
Smp_175890.1 SmLINC03769-IBu 0.90 3.06e-06 1.00e-04
Smp_177520.1 SmLINC03769-IBu 0.83 1.00e-04 1.50e-03
Smp_178400.1 SmLINC03769-IBu 0.94 6.97e-08 8.00e-06
Smp_178530.1 SmLINC03769-IBu 0.92 7.07e-07 4.01e-05
Smp_178620.1 SmLINC03769-IBu 0.94 1.85e-07 1.57e-05
Smp_178630.1 SmLINC03769-IBu 0.83 9.96e-05 1.40e-03
Smp_179270.1 SmLINC03769-IBu 0.80 3.00e-04 3.20e-03
Smp_180920.1 SmLINC03769-IBu -0.81 1.00e-04 2.20e-03
Smp_182890.1 SmLINC03769-IBu 0.81 2.00e-04 2.30e-03
Smp_182910.1 SmLINC03769-IBu 0.87 1.65e-05 3.00e-04
Smp_185080.1 SmLINC03769-IBu 0.83 8.94e-05 1.30e-03
Smp_186960.1 SmLINC03769-IBu 0.88 1.37e-05 3.00e-04
Smp_187350.1 SmLINC03769-IBu 0.91 1.43e-06 6.63e-05
Smp_188880.1 SmLINC03769-IBu 0.82 1.00e-04 1.70e-03
Smp_191250.1 SmLINC03769-IBu 0.88 1.06e-05 2.00e-04
Smp_192890.1 SmLINC03769-IBu 0.88 1.43e-05 3.00e-04
Smp_194770.1 SmLINC03769-IBu 0.81 1.00e-04 2.30e-03
Smp_194830.1 SmLINC03769-IBu 0.81 2.00e-04 2.60e-03
Smp_195070.1 SmLINC03769-IBu 0.80 2.00e-04 3.00e-03
Smp_195140.1 SmLINC03769-IBu 0.87 1.86e-05 4.00e-04
Smp_195160.1 SmLINC03769-IBu 0.84 8.72e-05 1.20e-03
Smp_196050.1 SmLINC03769-IBu 0.80 3.00e-04 3.10e-03
Smp_196700.1 SmLINC03769-IBu 0.88 1.04e-05 2.00e-04
Smp_198950.1 SmLINC03769-IBu 0.93 3.03e-07 2.21e-05
Smp_199470.1 SmLINC03769-IBu 0.85 4.09e-05 7.00e-04
Smp_199850.1 SmLINC03769-IBu 0.80 2.00e-04 2.80e-03
Smp_200320.1 SmLINC03769-IBu 0.80 2.00e-04 2.90e-03
Smp_200440.1 SmLINC03769-IBu -0.80 3.00e-04 3.40e-03
Smp_202690.1 SmLINC03769-IBu -0.81 2.00e-04 2.70e-03
Smp_203080.1 SmLINC03769-IBu 0.91 1.29e-06 6.16e-05
Smp_204770.1 SmLINC03769-IBu 0.80 3.00e-04 3.40e-03
Smp_205480.1 SmLINC03769-IBu 0.81 1.00e-04 2.10e-03
Smp_205860.1 SmLINC03769-IBu 0.88 9.42e-06 2.00e-04
Smp_206200.1 SmLINC03769-IBu 0.91 2.00e-06 8.42e-05
Smp_212100.1 SmLINC03769-IBu 0.82 1.00e-04 1.90e-03
Smp_212390.1 SmLINC03769-IBu 0.81 2.00e-04 2.50e-03
Smp_213890.1 SmLINC03769-IBu 0.87 1.55e-05 3.00e-04
Smp_213910.1 SmLINC03769-IBu 0.88 9.55e-06 2.00e-04
Smp_214020.1 SmLINC03769-IBu -0.85 4.06e-05 7.00e-04
Fig. S5 for SmLINC03769-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_206200.1 0 -1.74 -3.03 -14.12 -16.70
Smp_034940.3 0 -1.53 -6.25 -9.66 -13.38
Smp_009320.1 0 -0.45 -10.12 -7.98 -10.12
SmLINC03769-IBu 0 -1.05 -2.94 -6.89 -9.10

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_009320.1 SmLINC03769-IBu 0.91 1.98e-06 8.63e-05
Smp_034940.3 SmLINC03769-IBu 0.91 1.77e-06 8.00e-05
Smp_206200.1 SmLINC03769-IBu 0.91 2.00e-06 8.72e-05