Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC03739-IBu Data

Chromosome: Chr 5 - Coordinate: Chr 5:532298-540468 - Strand: +


Fig. S5 for SmLINC03739-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_059530.1 0 2.86 3.32 -11.10 -11.10
Smp_032120.1 0 0.03 1.02 -10.65 -10.65
Smp_159070.3 0 -0.25 1.24 -10.95 -4.48
SmLINC03739-IBu 0 0.68 2.57 -1.44 -2.85
Smp_062070.1 0 9.47 10.97 6.18 8.79
Smp_103540.1 0 11.43 12.63 8.84 9.65
Smp_084940.2 0 10.34 11.98 9.66 9.92

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_032120.1 SmLINC03739-IBu 0.91 1.91e-06 8.44e-05
Smp_059530.1 SmLINC03739-IBu 0.91 2.43e-06 1.00e-04
Smp_062070.1 SmLINC03739-IBu 0.92 7.72e-07 4.44e-05
Smp_084940.2 SmLINC03739-IBu 0.92 7.93e-07 4.53e-05
Smp_103540.1 SmLINC03739-IBu 0.92 9.85e-07 5.28e-05
Smp_159070.3 SmLINC03739-IBu 0.95 3.95e-08 5.75e-06