Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC03574-IBu Data

Chromosome: Chr 4 - Coordinate: Chr 4:23870330-23871616 - Strand: +


Fig. S5 for SmLINC03574-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_206200.1 0 -1.74 -3.03 -14.12 -16.70
Smp_205860.1 0 -1.49 -2.52 -10.82 -15.29
Smp_035090.2 0 -1.41 -2.69 -14.78 -14.86
Smp_192890.1 0 -1.10 -2.06 -12.83 -12.83
Smp_186130.1 0 -2.11 -1.47 -10.40 -10.85
Smp_182890.1 0 -1.33 -1.67 -9.07 -10.72
Smp_028990.3 0 -1.23 -2.49 -10.45 -10.45
SmLINC03574-IBu 0 -1.17 -2.16 -3.29 -5.27

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_028990.3 SmLINC03574-IBu 0.90 3.85e-06 1.00e-04
Smp_035090.2 SmLINC03574-IBu 0.92 1.13e-06 5.82e-05
Smp_182890.1 SmLINC03574-IBu 0.90 4.33e-06 1.00e-04
Smp_186130.1 SmLINC03574-IBu 0.92 5.50e-07 3.51e-05
Smp_192890.1 SmLINC03574-IBu 0.94 7.22e-08 8.66e-06
Smp_205860.1 SmLINC03574-IBu 0.92 7.01e-07 4.16e-05
Smp_206200.1 SmLINC03574-IBu 0.95 1.46e-08 2.95e-06