Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC03395-IBu Data

Chromosome: Chr 4 - Coordinate: Chr 4:14264087-14273888 - Strand: -


Fig. 6A for SmLINC03395-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_193700.1 0 2.00 0.59 -11.32 -11.32
Smp_176230.2 0 0.48 -0.91 -5.65 -11.30
Smp_193990.1 0 2.54 2.04 -11.18 -11.18
Smp_212510.1 0 -0.05 -0.36 -7.08 -10.79
Smp_168800.1 0 0.13 -0.51 -10.46 -10.46
Smp_086600.1 0 -0.12 -0.81 -6.58 -10.32
Smp_109340.1 0 1.47 0.69 -10.22 -10.22
Smp_111710.1 0 0.65 -0.08 -5.04 -9.36
Smp_179670.1 0 1.45 -1.30 -8.21 -9.30
Smp_035020.1 0 1.34 -0.55 -3.54 -8.45
Smp_161270.1 0 1.27 1.64 -8.43 -8.43
Smp_200770.1 0 1.89 0.38 -8.15 -8.15
Smp_201280.1 0 0.50 0.74 -4.14 -8.03
Smp_161230.1 0 0.25 -1.38 -5.05 -7.28
Smp_203790.1 0 1.11 -0.83 -4.01 -6.96
Smp_202340.1 0 0.90 1.72 -6.17 -6.91
Smp_109300.1 0 0.26 -0.46 -4.85 -6.86
Smp_201390.1 0 0.48 -0.11 -6.75 -6.75
Smp_059210.7 0 0.04 -0.34 -3.63 -6.60
Smp_021460.1 0 1.05 -0.56 -1.99 -6.60
Smp_008390.1 0 0.53 -0.79 -6.20 -6.20
Smp_136840.1 0 1.29 1.39 -6.10 -6.10
Smp_012010.1 0 0.26 0.29 -5.48 -5.97
Smp_141020.1 0 -0.45 -0.94 -9.20 -5.95
Smp_005260.2 0 -0.36 -1.30 -5.79 -5.89
Smp_031920.5 0 -0.42 -0.94 -6.54 -5.88
Smp_069220.1 0 1.51 -0.88 -4.10 -5.76
Smp_149750.1 0 1.75 -0.10 -5.34 -5.55
Smp_015190.1 0 0.66 -0.56 -4.33 -5.46
Smp_158310.1 0 -0.00 -0.69 -4.11 -5.43
Smp_034980.1 0 0.00 -0.47 -4.42 -5.42
Smp_148570.1 0 2.59 1.60 -3.08 -5.21
Smp_120020.1 0 -0.19 -0.59 -3.84 -5.21
Smp_090930.5 0 0.88 1.41 -11.45 -5.15
Smp_071640.1 0 -0.48 -1.03 -6.28 -5.01
Smp_203990.1 0 0.81 0.18 -4.26 -4.99
Smp_092780.1 0 -0.13 -0.30 -4.81 -4.98
Smp_078550.1 0 -0.05 -0.57 -4.38 -4.91
Smp_093740.2 0 1.50 0.51 -2.09 -4.86
Smp_142260.1 0 0.06 -0.92 -4.07 -4.74
Smp_002920.1 0 0.04 -0.86 -3.56 -4.70
Smp_159730.2 0 -0.26 -0.69 -4.33 -4.68
Smp_027010.1 0 1.13 0.23 -1.74 -4.63
Smp_198650.1 0 -0.01 -1.08 -4.05 -4.59
Smp_031770.7 0 0.70 0.33 -3.21 -4.54
Smp_202720.1 0 1.95 -0.39 -4.65 -4.47
Smp_005260.1 0 0.06 -1.49 -4.55 -4.46
Smp_034840.2 0 -0.14 -0.56 -4.27 -4.43
Smp_099810.1 0 -0.11 -0.66 -4.18 -4.40
Smp_058170.1 0 -0.02 0.05 -6.42 -4.35
Smp_160000.1 0 0.21 0.15 -4.03 -4.29
Smp_204820.1 0 1.32 1.25 -3.19 -4.27
Smp_107590.1 0 4.34 2.46 -4.22 -4.22
Smp_054750.1 0 -0.22 -0.71 -3.93 -4.21
Smp_157750.1 0 0.25 -0.37 -3.45 -4.12
Smp_192030.1 0 1.02 1.31 -3.21 -4.10
Smp_005080.1 0 0.96 -0.03 -3.26 -4.08
Smp_079280.1 0 1.10 0.35 -2.96 -4.05
Smp_139980.1 0 1.20 1.27 -1.25 -4.01
Smp_122830.1 0 -0.22 -0.24 -3.98 -3.99
Smp_061590.1 0 -0.29 -0.52 -4.09 -3.95
Smp_151220.1 0 1.28 1.74 -3.16 -3.91
Smp_017080.1 0 0.12 -0.36 -3.91 -3.88
Smp_159350.1 0 0.30 -0.77 -3.51 -3.83
Smp_212350.1 0 1.51 0.94 -3.08 -3.78
Smp_142980.1 0 0.95 0.31 -2.54 -3.71
Smp_142460.1 0 1.61 0.48 -3.34 -3.60
Smp_068920.3 0 -0.20 -1.33 -4.27 -3.53
Smp_196680.1 0 1.62 -1.20 -4.44 -3.36
Smp_164270.1 0 1.19 0.27 -2.73 -3.35
Smp_077860.1 0 1.35 0.90 -2.31 -3.33
Smp_045950.1 0 0.07 -1.04 -4.82 -3.27
Smp_138890.1 0 2.00 0.89 -2.07 -3.06
Smp_084210.1 0 0.94 -0.62 -4.01 -2.94
Smp_204830.1 0 1.96 1.08 -3.62 -2.92
Smp_049300.3 0 1.86 -0.79 -4.47 -2.75
SmLINC03395-IBu 0 1.75 0.29 -4.35 -2.74
Smp_201230.1 0 1.72 -0.34 -3.72 -2.51
Smp_205840.1 0 0.97 0.46 -4.31 -2.31
Smp_032280.1 0 2.61 1.80 -2.26 -2.27
Smp_205220.1 0 2.68 1.94 -1.09 -2.07
Smp_020220.2 0 3.03 2.60 0.67 -1.87
Smp_200600.1 0 3.98 2.91 -2.23 -1.39
Smp_146710.1 0 2.31 2.58 -1.48 -1.30
Smp_200460.1 0 -3.99 -5.18 -0.77 -0.23
Smp_143450.1 0 6.96 3.27 0.00 0.00
Smp_204950.1 0 5.97 5.20 0.00 0.00
Smp_035290.1 0 -2.51 -6.13 -0.77 0.19
Smp_900090.1 0 -3.47 -3.69 0.48 0.62
Smp_155610.1 0 -3.75 -6.34 0.72 0.81
Smp_068270.3 0 4.48 4.31 -7.70 1.13
Smp_026820.1 0 -3.23 -3.72 0.76 1.23
Smp_039640.1 0 9.69 9.38 7.53 8.56

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_002920.1 SmLINC03395-IBu 0.89 7.83e-06 2.00e-04
Smp_005080.1 SmLINC03395-IBu 0.90 4.48e-06 1.00e-04
Smp_005260.1 SmLINC03395-IBu 0.83 1.00e-04 1.50e-03
Smp_005260.2 SmLINC03395-IBu 0.81 2.00e-04 2.60e-03
Smp_008390.1 SmLINC03395-IBu 0.82 1.00e-04 2.00e-03
Smp_012010.1 SmLINC03395-IBu 0.81 2.00e-04 2.50e-03
Smp_015190.1 SmLINC03395-IBu 0.87 2.13e-05 4.00e-04
Smp_017080.1 SmLINC03395-IBu 0.87 2.12e-05 4.00e-04
Smp_020220.2 SmLINC03395-IBu 0.86 3.49e-05 6.00e-04
Smp_021460.1 SmLINC03395-IBu 0.86 2.50e-05 5.00e-04
Smp_026820.1 SmLINC03395-IBu -0.84 6.25e-05 1.00e-03
Smp_027010.1 SmLINC03395-IBu 0.92 8.15e-07 4.44e-05
Smp_031770.7 SmLINC03395-IBu 0.85 4.07e-05 7.00e-04
Smp_031920.5 SmLINC03395-IBu 0.81 1.00e-04 2.10e-03
Smp_032280.1 SmLINC03395-IBu 0.88 1.42e-05 3.00e-04
Smp_034840.2 SmLINC03395-IBu 0.83 1.00e-04 1.60e-03
Smp_034980.1 SmLINC03395-IBu 0.84 7.90e-05 1.10e-03
Smp_035020.1 SmLINC03395-IBu 0.87 2.07e-05 4.00e-04
Smp_035290.1 SmLINC03395-IBu -0.80 3.00e-04 3.30e-03
Smp_039640.1 SmLINC03395-IBu 0.88 1.46e-05 3.00e-04
Smp_045950.1 SmLINC03395-IBu 0.89 8.70e-06 2.00e-04
Smp_049300.3 SmLINC03395-IBu 0.81 2.00e-04 2.40e-03
Smp_054750.1 SmLINC03395-IBu 0.85 5.34e-05 8.00e-04
Smp_058170.1 SmLINC03395-IBu 0.86 3.88e-05 7.00e-04
Smp_059210.7 SmLINC03395-IBu 0.86 3.13e-05 6.00e-04
Smp_061590.1 SmLINC03395-IBu 0.81 1.00e-04 2.20e-03
Smp_068270.3 SmLINC03395-IBu 0.82 1.00e-04 1.80e-03
Smp_068920.3 SmLINC03395-IBu 0.88 1.43e-05 3.00e-04
Smp_069220.1 SmLINC03395-IBu 0.80 3.00e-04 3.10e-03
Smp_071640.1 SmLINC03395-IBu 0.80 3.00e-04 3.20e-03
Smp_077860.1 SmLINC03395-IBu 0.94 8.15e-08 8.92e-06
Smp_078550.1 SmLINC03395-IBu 0.84 6.47e-05 1.00e-03
Smp_079280.1 SmLINC03395-IBu 0.95 3.06e-08 4.56e-06
Smp_084210.1 SmLINC03395-IBu 0.87 1.58e-05 3.00e-04
Smp_086600.1 SmLINC03395-IBu 0.82 1.00e-04 2.00e-03
Smp_090930.5 SmLINC03395-IBu 0.81 2.00e-04 2.70e-03
Smp_092780.1 SmLINC03395-IBu 0.83 1.00e-04 1.40e-03
Smp_093740.2 SmLINC03395-IBu 0.92 7.54e-07 4.20e-05
Smp_099810.1 SmLINC03395-IBu 0.87 1.66e-05 3.00e-04
Smp_107590.1 SmLINC03395-IBu 0.83 9.30e-05 1.30e-03
Smp_109300.1 SmLINC03395-IBu 0.86 2.68e-05 5.00e-04
Smp_109340.1 SmLINC03395-IBu 0.88 9.61e-06 2.00e-04
Smp_111710.1 SmLINC03395-IBu 0.88 1.45e-05 3.00e-04
Smp_120020.1 SmLINC03395-IBu 0.84 8.35e-05 1.20e-03
Smp_122830.1 SmLINC03395-IBu 0.81 2.00e-04 2.50e-03
Smp_136840.1 SmLINC03395-IBu 0.89 8.13e-06 2.00e-04
Smp_138890.1 SmLINC03395-IBu 0.92 7.74e-07 4.28e-05
Smp_139980.1 SmLINC03395-IBu 0.89 7.81e-06 2.00e-04
Smp_141020.1 SmLINC03395-IBu 0.80 3.00e-04 3.30e-03
Smp_142260.1 SmLINC03395-IBu 0.81 2.00e-04 2.40e-03
Smp_142460.1 SmLINC03395-IBu 0.90 3.86e-06 1.00e-04
Smp_142980.1 SmLINC03395-IBu 0.81 2.00e-04 2.50e-03
Smp_143450.1 SmLINC03395-IBu 0.81 2.00e-04 2.30e-03
Smp_146710.1 SmLINC03395-IBu 0.81 2.00e-04 2.30e-03
Smp_148570.1 SmLINC03395-IBu 0.89 7.77e-06 2.00e-04
Smp_149750.1 SmLINC03395-IBu 0.85 4.36e-05 7.00e-04
Smp_151220.1 SmLINC03395-IBu 0.84 7.11e-05 1.10e-03
Smp_155610.1 SmLINC03395-IBu -0.82 1.00e-04 1.90e-03
Smp_157750.1 SmLINC03395-IBu 0.90 3.54e-06 1.00e-04
Smp_158310.1 SmLINC03395-IBu 0.83 1.00e-04 1.40e-03
Smp_159350.1 SmLINC03395-IBu 0.87 2.48e-05 5.00e-04
Smp_159730.2 SmLINC03395-IBu 0.81 1.00e-04 2.20e-03
Smp_160000.1 SmLINC03395-IBu 0.90 2.87e-06 1.00e-04
Smp_161230.1 SmLINC03395-IBu 0.90 2.77e-06 1.00e-04
Smp_161270.1 SmLINC03395-IBu 0.80 2.00e-04 2.80e-03
Smp_164270.1 SmLINC03395-IBu 0.95 3.03e-08 4.53e-06
Smp_168800.1 SmLINC03395-IBu 0.82 1.00e-04 1.90e-03
Smp_176230.2 SmLINC03395-IBu 0.89 7.09e-06 2.00e-04
Smp_179670.1 SmLINC03395-IBu 0.86 2.94e-05 5.00e-04
Smp_192030.1 SmLINC03395-IBu 0.81 2.00e-04 2.50e-03
Smp_193700.1 SmLINC03395-IBu 0.86 3.57e-05 6.00e-04
Smp_193990.1 SmLINC03395-IBu 0.87 1.63e-05 3.00e-04
Smp_196680.1 SmLINC03395-IBu 0.83 1.00e-04 1.60e-03
Smp_198650.1 SmLINC03395-IBu 0.83 1.00e-04 1.50e-03
Smp_200460.1 SmLINC03395-IBu -0.80 3.00e-04 3.30e-03
Smp_200600.1 SmLINC03395-IBu 0.95 3.27e-08 4.77e-06
Smp_200770.1 SmLINC03395-IBu 0.80 3.00e-04 3.20e-03
Smp_201230.1 SmLINC03395-IBu 0.93 3.42e-07 2.41e-05
Smp_201280.1 SmLINC03395-IBu 0.87 2.36e-05 4.00e-04
Smp_201390.1 SmLINC03395-IBu 0.80 3.00e-04 3.20e-03
Smp_202340.1 SmLINC03395-IBu 0.89 8.70e-06 2.00e-04
Smp_202720.1 SmLINC03395-IBu 0.82 1.00e-04 2.10e-03
Smp_203790.1 SmLINC03395-IBu 0.81 2.00e-04 2.40e-03
Smp_203990.1 SmLINC03395-IBu 0.83 9.45e-05 1.30e-03
Smp_204820.1 SmLINC03395-IBu 0.90 2.87e-06 1.00e-04
Smp_204830.1 SmLINC03395-IBu 0.94 1.58e-07 1.41e-05
Smp_204950.1 SmLINC03395-IBu 0.86 2.82e-05 5.00e-04
Smp_205220.1 SmLINC03395-IBu 0.89 6.74e-06 2.00e-04
Smp_205840.1 SmLINC03395-IBu 0.89 6.62e-06 1.00e-04
Smp_212350.1 SmLINC03395-IBu 0.80 3.00e-04 3.20e-03
Smp_212510.1 SmLINC03395-IBu 0.84 8.61e-05 1.20e-03
Smp_900090.1 SmLINC03395-IBu -0.82 1.00e-04 2.10e-03