Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC03226-IBu Data

Chromosome: Chr 4 - Coordinate: Chr 4:8487532-8491353 - Strand: -

Fig. S5 for SmLINC03226-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_077880.1 0 -0.58 -1.01 -13.13 -13.13
Smp_024140.1 0 0.15 -0.05 -5.68 -10.99
SmLINC03226-IBu 0 -0.03 -0.23 -5.79 -4.81

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_024140.1 SmLINC03226-IBu 0.90 2.74e-06 1.00e-04
Smp_077880.1 SmLINC03226-IBu 0.96 1.12e-08 2.47e-06