Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC02678-IBu Data

Chromosome: Chr 3 - Coordinate: Chr 3:11787431-11788989 - Strand: +


Fig. 6A for SmLINC02678-IBu with r ≥ 0.8 or r ≤ -0.8.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_169190.1 0 -3.08 -5.99 -19.20 -16.89
Smp_183020.1 0 -2.31 -1.58 -15.79 -15.79
Smp_183020.6 0 -2.31 -1.58 -15.79 -15.79
Smp_184460.1 0 -2.24 -5.26 -13.63 -13.63
Smp_055220.2 0 -2.15 -2.21 -13.10 -13.10
Smp_185360.1 0 -2.43 -5.85 -12.83 -12.83
Smp_134410.1 0 -2.22 -3.88 -6.81 -12.78
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_055770.1 0 -5.16 -5.96 -12.28 -12.28
Smp_079970.1 0 -3.36 -6.77 -9.16 -12.28
Smp_032980.1 0 -3.49 -10.60 -12.19 -12.01
Smp_009650.2 0 -7.49 -7.79 -8.95 -11.71
Smp_152780.1 0 -4.06 -8.92 -8.72 -11.55
Smp_206150.1 0 -1.95 -4.12 -11.47 -11.47
Smp_133770.1 0 -4.18 -7.68 -11.38 -11.45
Smp_153240.1 0 -4.59 -8.67 -11.23 -11.04
Smp_178240.1 0 -3.79 -9.33 -8.87 -11.00
Smp_071380.2 0 -3.62 -7.62 -10.38 -10.26
Smp_154010.1 0 -1.98 -1.23 -7.66 -10.11
Smp_168380.1 0 -1.89 -2.82 -9.66 -9.66
Smp_182880.1 0 -2.14 -2.31 -8.86 -9.55
Smp_002930.1 0 -1.91 -4.36 -9.53 -9.53
Smp_014400.5 0 -2.15 -4.06 -6.32 -9.42
Smp_190190.1 0 -1.71 -0.81 -9.39 -9.39
Smp_149670.1 0 -1.98 -3.69 -10.45 -9.35
Smp_108050.1 0 -2.06 -3.07 -8.81 -9.10
Smp_005860.3 0 -2.06 -4.24 -7.23 -8.92
Smp_186170.1 0 -1.79 -1.59 -7.16 -8.78
Smp_046090.1 0 -4.19 -6.28 -7.15 -8.65
Smp_074570.1 0 -1.85 -4.23 -8.15 -8.27
Smp_194000.1 0 -1.48 -1.97 -6.64 -8.23
Smp_194770.1 0 -2.35 -7.85 -7.77 -7.92
Smp_135250.1 0 -4.50 -7.60 -5.52 -7.87
Smp_145710.1 0 -1.79 -2.79 -7.90 -7.78
Smp_005860.1 0 -1.88 -5.14 -8.12 -7.71
Smp_114910.1 0 -3.08 -7.52 -7.91 -7.70
Smp_195160.1 0 -1.78 -3.62 -7.03 -7.47
Smp_057790.1 0 -3.82 -7.29 -4.86 -7.43
Smp_099680.1 0 -3.17 -4.14 -4.93 -7.18
Smp_038560.6 0 -3.08 -4.79 -5.99 -7.18
Smp_105610.1 0 -3.66 -7.36 -5.82 -7.17
Smp_186610.1 0 -3.09 -6.92 -6.26 -7.07
Smp_179640.1 0 -2.62 -9.51 -6.28 -7.06
Smp_145340.1 0 -2.62 -9.51 -6.28 -7.06
Smp_183420.1 0 -2.62 -9.51 -6.28 -7.06
Smp_205080.1 0 -1.33 -0.97 -6.34 -7.04
Smp_135180.1 0 -2.02 -1.68 -4.72 -7.04
Smp_140280.1 0 -5.33 -2.89 -7.26 -6.97
Smp_194040.1 0 -2.17 -6.63 -5.72 -6.95
Smp_202700.1 0 -2.94 -2.50 -4.90 -6.94
Smp_099670.1 0 -3.51 -4.19 -5.26 -6.78
Smp_028990.2 0 -2.03 -4.85 -4.73 -6.76
Smp_192880.1 0 -2.57 -3.41 -5.24 -6.71
Smp_038530.1 0 -2.20 -4.62 -4.98 -6.68
Smp_185180.1 0 -1.60 -2.75 -5.44 -6.67
Smp_205970.1 0 -3.84 -6.54 -6.54 -6.54
Smp_136240.9 0 -3.09 -3.16 -4.37 -6.52
Smp_030500.1 0 -2.77 -6.42 -6.74 -6.44
Smp_205900.1 0 -3.56 -6.12 -5.80 -6.36
Smp_106390.1 0 -2.35 -4.90 -10.78 -6.23
Smp_018880.1 0 -2.71 -8.49 -10.03 -6.16
Smp_093930.1 0 -2.05 -2.86 -4.42 -6.13
Smp_057060.1 0 -3.71 -5.93 -6.06 -6.08
Smp_079220.1 0 -2.48 -4.55 -6.52 -5.99
Smp_157310.1 0 -3.02 -6.78 -4.07 -5.91
Smp_214150.1 0 -3.99 -7.32 -3.18 -5.90
Smp_083720.1 0 -2.37 -5.50 -6.31 -5.77
SmLINC02678-IBu 0 -3.18 -2.40 -3.22 -5.56
Smp_065580.1 0 -2.41 -12.61 -6.08 -5.45
Smp_154020.1 0 -1.89 -2.51 -3.88 -5.45
Smp_006560.1 0 -3.55 -6.46 -6.31 -5.44
Smp_061870.1 0 -2.53 -4.47 -5.29 -5.38
Smp_016730.1 0 -3.42 -4.55 -5.13 -5.31
Smp_092320.1 0 -1.82 -3.08 -5.42 -5.28
Smp_060900.2 0 -2.06 -2.01 -4.40 -5.14
Smp_204770.1 0 -2.64 -6.46 -5.44 -5.13
Smp_074560.1 0 -3.36 -3.15 -2.58 -5.11
Smp_061940.1 0 -2.48 -6.54 -5.15 -5.02
Smp_092880.2 0 -1.50 -1.62 -3.72 -5.02
Smp_166950.1 0 -1.86 -2.33 -5.56 -4.94
Smp_034550.1 0 -2.91 -5.29 -2.60 -4.93
Smp_079290.3 0 -3.16 -1.89 -6.40 -4.87
Smp_042160.1 0 -2.29 -5.11 -4.28 -4.75
Smp_133310.1 0 -1.74 -4.20 -4.35 -4.73
Smp_152260.1 0 -3.17 -4.39 -4.03 -4.71
Smp_148800.1 0 -3.26 -5.77 -5.61 -4.70
Smp_129190.1 0 -4.25 -6.94 -3.48 -4.65
Smp_033610.1 0 -2.04 -4.32 -5.07 -4.63
Smp_022430.1 0 -3.19 -4.81 -4.61 -4.50
Smp_184750.1 0 -1.93 -3.13 -4.74 -4.46
Smp_125440.1 0 -4.16 -3.48 -3.28 -4.46
Smp_164850.1 0 -2.43 -3.75 -2.48 -4.46
Smp_197110.1 0 -1.94 -2.50 -4.24 -4.44
Smp_002510.1 0 -3.00 -2.99 -4.71 -4.29
Smp_139250.1 0 -4.34 -6.53 -2.10 -4.27
Smp_033400.1 0 -2.69 -7.71 -5.07 -4.27
Smp_019750.2 0 -2.70 -5.17 -4.10 -4.19
Smp_050830.1 0 -1.69 -2.62 -4.49 -4.19
Smp_154300.1 0 -4.18 -5.59 -3.13 -4.15
Smp_120920.3 0 -1.87 -3.40 -3.67 -4.06
Smp_002640.1 0 -3.78 -3.97 -2.17 -4.00
Smp_179460.1 0 -2.52 -7.07 -4.09 -3.97
Smp_063090.1 0 -2.16 -4.16 -3.57 -3.93
Smp_021730.1 0 -2.52 -3.78 -4.00 -3.90
Smp_159190.1 0 -3.70 -3.60 -3.46 -3.88
Smp_071390.1 0 -3.12 -4.67 -2.84 -3.82
Smp_205190.1 0 -5.03 -3.88 -4.78 -3.78
Smp_036250.1 0 -3.24 -3.82 -4.15 -3.72
Smp_155890.1 0 -3.01 -4.45 -2.70 -3.71
Smp_003770.1 0 -2.73 -3.76 -4.30 -3.65
Smp_079920.1 0 -2.43 -3.90 -3.20 -3.57
Smp_097750.1 0 -1.63 -3.99 -4.48 -3.56
Smp_052060.1 0 -2.31 -3.14 -4.09 -3.50
Smp_038100.1 0 -2.11 -3.55 -4.08 -3.42
Smp_055210.1 0 -1.70 -3.76 -4.03 -3.39
Smp_035270.2 0 -2.51 -3.90 -3.56 -3.15
Smp_054470.1 0 -3.95 -5.79 -2.45 -3.05
Smp_099420.1 0 -2.79 -4.14 -4.04 -2.98
Smp_154370.1 0 -2.82 -7.17 -3.52 -2.90
Smp_112480.1 0 -3.87 -4.82 -3.33 -2.83
Smp_113710.1 0 -3.35 -5.78 -3.90 -2.82
Smp_097490.1 0 -3.10 -5.15 -2.72 -1.99

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_002510.1 SmLINC02678-IBu 0.85 4.39e-05 7.00e-04
Smp_002640.1 SmLINC02678-IBu 0.84 6.03e-05 9.00e-04
Smp_002930.1 SmLINC02678-IBu 0.86 3.58e-05 6.00e-04
Smp_003770.1 SmLINC02678-IBu 0.93 2.65e-07 2.01e-05
Smp_005860.1 SmLINC02678-IBu 0.81 1.00e-04 2.20e-03
Smp_005860.3 SmLINC02678-IBu 0.81 2.00e-04 2.40e-03
Smp_006560.1 SmLINC02678-IBu 0.91 1.59e-06 7.15e-05
Smp_009650.2 SmLINC02678-IBu 0.80 3.00e-04 3.30e-03
Smp_014400.5 SmLINC02678-IBu 0.83 9.24e-05 1.30e-03
Smp_016730.1 SmLINC02678-IBu 0.85 5.49e-05 9.00e-04
Smp_018880.1 SmLINC02678-IBu 0.87 2.48e-05 5.00e-04
Smp_019750.2 SmLINC02678-IBu 0.90 3.45e-06 1.00e-04
Smp_021730.1 SmLINC02678-IBu 0.91 1.79e-06 7.77e-05
Smp_022430.1 SmLINC02678-IBu 0.91 2.41e-06 9.61e-05
Smp_028990.2 SmLINC02678-IBu 0.82 1.00e-04 1.70e-03
Smp_030500.1 SmLINC02678-IBu 0.86 3.54e-05 6.00e-04
Smp_032980.1 SmLINC02678-IBu 0.80 2.00e-04 2.90e-03
Smp_033400.1 SmLINC02678-IBu 0.82 1.00e-04 1.90e-03
Smp_033610.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_034550.1 SmLINC02678-IBu 0.86 2.63e-05 5.00e-04
Smp_035270.2 SmLINC02678-IBu 0.86 3.67e-05 6.00e-04
Smp_036250.1 SmLINC02678-IBu 0.91 2.48e-06 9.81e-05
Smp_038100.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_038530.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_038560.6 SmLINC02678-IBu 0.85 5.83e-05 9.00e-04
Smp_042160.1 SmLINC02678-IBu 0.85 4.82e-05 8.00e-04
Smp_046090.1 SmLINC02678-IBu 0.81 1.00e-04 2.20e-03
Smp_050830.1 SmLINC02678-IBu 0.82 1.00e-04 2.10e-03
Smp_052060.1 SmLINC02678-IBu 0.91 1.60e-06 7.17e-05
Smp_054470.1 SmLINC02678-IBu 0.84 7.33e-05 1.10e-03
Smp_055210.1 SmLINC02678-IBu 0.83 1.00e-04 1.60e-03
Smp_055220.2 SmLINC02678-IBu 0.80 3.00e-04 3.40e-03
Smp_055770.1 SmLINC02678-IBu 0.82 1.00e-04 1.90e-03
Smp_057060.1 SmLINC02678-IBu 0.91 1.33e-06 6.30e-05
Smp_057790.1 SmLINC02678-IBu 0.90 2.54e-06 9.98e-05
Smp_060900.2 SmLINC02678-IBu 0.90 3.37e-06 1.00e-04
Smp_061870.1 SmLINC02678-IBu 0.90 2.78e-06 1.00e-04
Smp_061940.1 SmLINC02678-IBu 0.84 6.54e-05 1.00e-03
Smp_063090.1 SmLINC02678-IBu 0.83 9.80e-05 1.30e-03
Smp_065580.1 SmLINC02678-IBu 0.83 9.64e-05 1.30e-03
Smp_071380.2 SmLINC02678-IBu 0.83 1.00e-04 1.60e-03
Smp_071390.1 SmLINC02678-IBu 0.86 3.78e-05 6.00e-04
Smp_074560.1 SmLINC02678-IBu 0.95 3.06e-08 4.56e-06
Smp_074570.1 SmLINC02678-IBu 0.83 9.43e-05 1.30e-03
Smp_079220.1 SmLINC02678-IBu 0.86 3.06e-05 5.00e-04
Smp_079290.3 SmLINC02678-IBu 0.82 1.00e-04 1.70e-03
Smp_079920.1 SmLINC02678-IBu 0.84 8.32e-05 1.20e-03
Smp_079970.1 SmLINC02678-IBu 0.81 2.00e-04 2.60e-03
Smp_083720.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_092320.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_092880.2 SmLINC02678-IBu 0.84 8.31e-05 1.20e-03
Smp_093930.1 SmLINC02678-IBu 0.80 2.00e-04 2.80e-03
Smp_097490.1 SmLINC02678-IBu 0.84 8.27e-05 1.20e-03
Smp_097750.1 SmLINC02678-IBu 0.80 2.00e-04 2.90e-03
Smp_099420.1 SmLINC02678-IBu 0.88 1.10e-05 2.00e-04
Smp_099670.1 SmLINC02678-IBu 0.91 2.04e-06 8.54e-05
Smp_099680.1 SmLINC02678-IBu 0.83 1.00e-04 1.50e-03
Smp_102670.1 SmLINC02678-IBu 0.90 4.13e-06 1.00e-04
Smp_105610.1 SmLINC02678-IBu 0.87 2.14e-05 4.00e-04
Smp_106390.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_108050.1 SmLINC02678-IBu 0.87 1.83e-05 4.00e-04
Smp_112480.1 SmLINC02678-IBu 0.81 2.00e-04 2.40e-03
Smp_113710.1 SmLINC02678-IBu 0.80 2.00e-04 3.00e-03
Smp_114910.1 SmLINC02678-IBu 0.83 9.18e-05 1.30e-03
Smp_120920.3 SmLINC02678-IBu 0.84 6.12e-05 9.00e-04
Smp_125440.1 SmLINC02678-IBu 0.94 9.07e-08 9.59e-06
Smp_129190.1 SmLINC02678-IBu 0.87 2.31e-05 4.00e-04
Smp_133310.1 SmLINC02678-IBu 0.83 9.83e-05 1.30e-03
Smp_133770.1 SmLINC02678-IBu 0.91 2.15e-06 8.84e-05
Smp_134410.1 SmLINC02678-IBu 0.86 3.06e-05 5.00e-04
Smp_135180.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_135250.1 SmLINC02678-IBu 0.92 8.76e-07 4.67e-05
Smp_136240.9 SmLINC02678-IBu 0.94 1.40e-07 1.30e-05
Smp_139250.1 SmLINC02678-IBu 0.83 9.10e-05 1.30e-03
Smp_140280.1 SmLINC02678-IBu 0.90 2.70e-06 1.00e-04
Smp_145340.1 SmLINC02678-IBu 0.88 1.22e-05 3.00e-04
Smp_145710.1 SmLINC02678-IBu 0.82 1.00e-04 1.80e-03
Smp_148800.1 SmLINC02678-IBu 0.83 1.00e-04 1.50e-03
Smp_149670.1 SmLINC02678-IBu 0.88 1.44e-05 3.00e-04
Smp_152260.1 SmLINC02678-IBu 0.91 1.64e-06 7.30e-05
Smp_152780.1 SmLINC02678-IBu 0.85 5.83e-05 9.00e-04
Smp_153240.1 SmLINC02678-IBu 0.91 1.72e-06 7.57e-05
Smp_154010.1 SmLINC02678-IBu 0.84 7.12e-05 1.10e-03
Smp_154020.1 SmLINC02678-IBu 0.89 4.98e-06 1.00e-04
Smp_154300.1 SmLINC02678-IBu 0.85 4.81e-05 8.00e-04
Smp_154370.1 SmLINC02678-IBu 0.81 1.00e-04 2.20e-03
Smp_155890.1 SmLINC02678-IBu 0.88 1.12e-05 2.00e-04
Smp_157310.1 SmLINC02678-IBu 0.89 5.51e-06 1.00e-04
Smp_159190.1 SmLINC02678-IBu 0.95 2.40e-08 3.86e-06
Smp_164850.1 SmLINC02678-IBu 0.85 4.66e-05 8.00e-04
Smp_166950.1 SmLINC02678-IBu 0.86 2.91e-05 5.00e-04
Smp_168380.1 SmLINC02678-IBu 0.82 1.00e-04 2.10e-03
Smp_169190.1 SmLINC02678-IBu 0.91 2.17e-06 8.92e-05
Smp_178240.1 SmLINC02678-IBu 0.88 8.86e-06 2.00e-04
Smp_179460.1 SmLINC02678-IBu 0.80 2.00e-04 3.10e-03
Smp_179640.1 SmLINC02678-IBu 0.88 1.22e-05 3.00e-04
Smp_182880.1 SmLINC02678-IBu 0.88 1.00e-05 2.00e-04
Smp_183020.1 SmLINC02678-IBu 0.85 4.75e-05 8.00e-04
Smp_183020.6 SmLINC02678-IBu 0.85 4.75e-05 8.00e-04
Smp_183420.1 SmLINC02678-IBu 0.88 1.22e-05 3.00e-04
Smp_184460.1 SmLINC02678-IBu 0.81 2.00e-04 2.40e-03
Smp_184750.1 SmLINC02678-IBu 0.87 1.69e-05 3.00e-04
Smp_185180.1 SmLINC02678-IBu 0.83 1.00e-04 1.40e-03
Smp_185360.1 SmLINC02678-IBu 0.84 8.33e-05 1.20e-03
Smp_186170.1 SmLINC02678-IBu 0.80 2.00e-04 3.10e-03
Smp_186610.1 SmLINC02678-IBu 0.80 3.00e-04 3.20e-03
Smp_190190.1 SmLINC02678-IBu 0.85 3.95e-05 7.00e-04
Smp_192880.1 SmLINC02678-IBu 0.84 7.86e-05 1.10e-03
Smp_194000.1 SmLINC02678-IBu 0.82 1.00e-04 2.00e-03
Smp_194040.1 SmLINC02678-IBu 0.81 2.00e-04 2.60e-03
Smp_194770.1 SmLINC02678-IBu 0.81 2.00e-04 2.60e-03
Smp_195160.1 SmLINC02678-IBu 0.81 2.00e-04 2.40e-03
Smp_197110.1 SmLINC02678-IBu 0.88 9.45e-06 2.00e-04
Smp_202700.1 SmLINC02678-IBu 0.82 1.00e-04 2.00e-03
Smp_204770.1 SmLINC02678-IBu 0.81 2.00e-04 2.60e-03
Smp_205080.1 SmLINC02678-IBu 0.83 9.54e-05 1.30e-03
Smp_205190.1 SmLINC02678-IBu 0.87 2.06e-05 4.00e-04
Smp_205900.1 SmLINC02678-IBu 0.91 1.65e-06 7.35e-05
Smp_205970.1 SmLINC02678-IBu 0.81 2.00e-04 2.50e-03
Smp_206150.1 SmLINC02678-IBu 0.81 2.00e-04 2.70e-03
Smp_214150.1 SmLINC02678-IBu 0.90 4.16e-06 1.00e-04
Fig. S5 for SmLINC02678-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
Smp_169190.1 0 -3.08 -5.99 -19.20 -16.89
Smp_102670.1 0 -2.95 -8.79 -12.62 -12.62
Smp_133770.1 0 -4.18 -7.68 -11.38 -11.45
Smp_153240.1 0 -4.59 -8.67 -11.23 -11.04
SmLINC02678-IBu 0 -3.18 -2.40 -3.22 -5.56

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_102670.1 SmLINC02678-IBu 0.90 4.13e-06 1.00e-04
Smp_133770.1 SmLINC02678-IBu 0.91 2.15e-06 9.15e-05
Smp_153240.1 SmLINC02678-IBu 0.91 1.72e-06 7.85e-05
Smp_169190.1 SmLINC02678-IBu 0.91 2.17e-06 9.23e-05