Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC02619-IBu Data

Chromosome: Chr 3 - Coordinate: Chr 3:9604240-9629887 - Strand: +

Fig. S5 for SmLINC02619-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_176230.2 0 0.48 -0.91 -5.65 -11.30
Smp_125070.1 0 0.25 -4.98 -10.91 -10.91
SmLINC02619-IBu 0 0.93 -1.12 -9.65 -4.32

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_125070.1 SmLINC02619-IBu 0.90 3.35e-06 1.00e-04
Smp_176230.2 SmLINC02619-IBu 0.93 2.47e-07 2.01e-05