Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC02549-IBu Data

Chromosome: Chr 3 - Coordinate: Chr 3:6381430-6383980 - Strand: -

Fig. S5 for SmLINC02549-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
SmLINC02549-IBu 0 -2.06 -0.64 2.20 -2.58
Smp_160360.1 0 0.49 1.23 10.10 7.29
Smp_125200.1 0 0.00 7.38 10.66 9.27

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_125200.1 SmLINC02549-IBu 0.92 1.19e-06 6.03e-05
Smp_160360.1 SmLINC02549-IBu 0.91 2.50e-06 1.00e-04