Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC02322-IBu Data

Chromosome: Chr 3 - Coordinate: Chr 3:744907-746976 - Strand: -

Fig. S5 for SmLINC02322-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_109340.1 0 1.47 0.69 -10.22 -10.22
Smp_090930.5 0 0.88 1.41 -11.45 -5.15
SmLINC02322-IBu 0 3.00 3.04 -2.38 -2.45

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_090930.5 SmLINC02322-IBu 0.93 2.58e-07 2.07e-05
Smp_109340.1 SmLINC02322-IBu 0.90 4.34e-06 1.00e-04