Schistosoma mansoni lncRNAs Database

This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068,

Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.

SmLINC01834-IBu Data

Chromosome: Chr 2 - Coordinate: Chr 2:11968333-11980928 - Strand: -

Fig. S5 for SmLINC01834-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data

Gene ID Cerc 3S 24S Male Female
Smp_123000.1 0 0.49 -5.87 -12.08 -12.08
Smp_009320.1 0 -0.45 -10.12 -7.98 -10.12
SmLINC01834-IBu 0 0.05 -2.77 -8.44 -8.44

Pearson Correlation Coefficient Data - Download data

Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_009320.1 SmLINC01834-IBu 0.92 9.38e-07 5.10e-05
Smp_123000.1 SmLINC01834-IBu 0.91 2.19e-06 9.28e-05