Schistosoma mansoni lncRNAs Database



This site contains the web resource described in the paper "Atlas of Schistosoma mansoni long non-coding RNAs and their expression correlation to protein-coding genes" (2018) by Elton J. R. Vasconcelos, Vinícius C. Mesel, Lucas F. daSilva, David S. Pires, Guilherme M. Lavezzo, Adriana S. A. Pereira, Murilo S. Amaral and Sergio Verjovski-Almeida, Database, Volume 2018: bay068, https://doi.org/10.1093/database/bay068.


Based on data from Vasconcelos, EJR et al., The Schistosoma mansoni genome encodes thousands of long noncoding RNAs predicted to be functional at different parasite life-cycle stages. Scientific Reports 7: 10508, 2017.


SmLINC01366-IBu Data

Chromosome: Chr 1 - Coordinate: Chr 1:56044062-56055924 - Strand: +


Fig. S5 for SmLINC01366-IBu with r ≥ 0.9 or r ≤ -0.9.

Expression Fold Change Data [log2(FC)] - Download data


Gene ID Cerc 3S 24S Male Female
SmLINC01366-IBu 0 -0.99 0.01 4.64 5.16
Smp_031770.10 0 0.00 0.00 10.09 10.31
Smp_095410.1 0 0.00 0.00 10.39 11.31
Smp_145400.1 0 4.59 7.69 11.32 11.39

Pearson Correlation Coefficient Data - Download data


Compared Gene Gene Pearson Correlation Value p-value B.-H. adjusted p-value
Smp_031770.10 SmLINC01366-IBu 0.92 5.85e-07 3.66e-05
Smp_095410.1 SmLINC01366-IBu 0.91 1.40e-06 6.77e-05
Smp_145400.1 SmLINC01366-IBu 0.90 4.51e-06 1.00e-04